The 2.0 version of rSNPBase

Variant report

Variant rs17221367
Chromosome Location chr2:172340736-172340737
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172292000-172341600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr2:172298600-172341400 Weak transcription NHLF lung
3 chr2:172306000-172348000 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr2:172307800-172341200 Weak transcription Right Ventricle heart
5 chr2:172309600-172348400 Weak transcription Fetal Heart heart
6 chr2:172324800-172341200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:172327000-172346800 Weak transcription Colonic Mucosa Colon
8 chr2:172327200-172341200 Weak transcription Rectal Smooth Muscle rectum
9 chr2:172327200-172341600 Weak transcription Brain Germinal Matrix brain
10 chr2:172327200-172344000 Weak transcription Gastric stomach
11 chr2:172327200-172346600 Weak transcription Thymus Thymus
12 chr2:172327200-172348800 Weak transcription Spleen Spleen
13 chr2:172327400-172340800 Weak transcription Lung lung
14 chr2:172327400-172341200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:172327400-172341200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:172327400-172341400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr2:172327400-172343400 Weak transcription A549 lung
18 chr2:172327400-172346800 Weak transcription Hela-S3 cervix
19 chr2:172327400-172347600 Weak transcription Brain Cingulate Gyrus brain
20 chr2:172327600-172344800 Weak transcription Brain Anterior Caudate brain
21 chr2:172327800-172346000 Weak transcription Fetal Brain Male brain
22 chr2:172330400-172346200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr2:172331400-172345800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:172331800-172343400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr2:172332200-172340800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr2:172332200-172341000 Weak transcription Brain Hippocampus Middle brain
27 chr2:172332200-172341200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr2:172332200-172342800 Weak transcription Colon Smooth Muscle Colon
29 chr2:172332200-172344000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:172332600-172341200 Weak transcription Fetal Brain Female brain
31 chr2:172332800-172343600 Weak transcription Fetal Kidney kidney
32 chr2:172333400-172345400 Weak transcription NHDF-Ad bronchial
33 chr2:172333400-172347800 Weak transcription Brain Angular Gyrus brain
34 chr2:172334600-172349200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr2:172334800-172345000 Weak transcription Fetal Intestine Small intestine
36 chr2:172334800-172345200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:172334800-172346200 Weak transcription Psoas Muscle Psoas
38 chr2:172334800-172346800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:172334800-172347200 Weak transcription Brain Inferior Temporal Lobe brain
40 chr2:172334800-172349200 Weak transcription Esophagus oesophagus
41 chr2:172335000-172345000 Weak transcription Muscle Satellite Cultured Cells --
42 chr2:172335200-172346400 Weak transcription Stomach Smooth Muscle stomach
43 chr2:172335400-172349000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr2:172335600-172344600 Weak transcription Osteobl bone
45 chr2:172336200-172341000 Weak transcription HUVEC blood vessel
46 chr2:172336800-172342200 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr2:172337000-172342000 Weak transcription NH-A brain
48 chr2:172337200-172344200 Weak transcription Liver Liver
49 chr2:172337600-172344800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr2:172337800-172344200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015