Variant report
| Variant | rs17239543 |
|---|---|
| Chromosome Location | chr15:57602126-57602127 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:57599000-57603000 | Weak transcription | K562 | blood |
| 2 | chr15:57599400-57602600 | Weak transcription | Brain Germinal Matrix | brain |
| 3 | chr15:57599400-57604600 | Weak transcription | Right Ventricle | heart |
| 4 | chr15:57599400-57605000 | Weak transcription | Fetal Brain Female | brain |
| 5 | chr15:57599400-57612800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 6 | chr15:57599600-57602400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr15:57599600-57602400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr15:57599600-57603800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr15:57599600-57604600 | Weak transcription | Fetal Thymus | thymus |
| 10 | chr15:57599600-57604600 | Weak transcription | Left Ventricle | heart |
| 11 | chr15:57599600-57604600 | Weak transcription | Pancreas | Pancrea |
| 12 | chr15:57599600-57604600 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr15:57599600-57604600 | Weak transcription | Right Atrium | heart |
| 14 | chr15:57599600-57604800 | Weak transcription | Fetal Brain Male | brain |
| 15 | chr15:57599600-57612400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr15:57599600-57612800 | Weak transcription | GM12878-XiMat | blood |
| 17 | chr15:57599600-57614200 | Weak transcription | Small Intestine | intestine |
| 18 | chr15:57599600-57617800 | Weak transcription | Spleen | Spleen |
| 19 | chr15:57599800-57603000 | Strong transcription | Primary B cells from cord blood | blood |
| 20 | chr15:57600000-57602400 | Weak transcription | Fetal Muscle Leg | muscle |
| 21 | chr15:57600000-57602600 | Weak transcription | Gastric | stomach |
| 22 | chr15:57600000-57604400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 23 | chr15:57600200-57602600 | Strong transcription | Primary B cells from peripheral blood | blood |
| 24 | chr15:57600200-57603000 | Weak transcription | Stomach Mucosa | stomach |
| 25 | chr15:57600200-57604400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 26 | chr15:57600200-57605000 | Weak transcription | Fetal Kidney | kidney |
| 27 | chr15:57600400-57602200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr15:57600600-57602400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 29 | chr15:57600600-57602600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 30 | chr15:57600600-57604200 | Weak transcription | Fetal Lung | lung |
| 31 | chr15:57600800-57603800 | Weak transcription | HepG2 | liver |
| 32 | chr15:57601200-57602400 | Weak transcription | Fetal Intestine Small | intestine |
| 33 | chr15:57601400-57602400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 34 | chr15:57601400-57603000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 35 | chr15:57601400-57605200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 36 | chr15:57601800-57602600 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 37 | chr15:57602000-57602600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 38 | chr15:57602000-57602800 | Enhancers | Placenta | Placenta |
| 39 | chr15:57602000-57605600 | Enhancers | Fetal Stomach | stomach |
| 40 | chr15:57602000-57605800 | Enhancers | Fetal Muscle Trunk | muscle |
| 41 | chr15:57602000-57606800 | Enhancers | Fetal Intestine Large | intestine |
