Variant report

Variant rs17243276
Chromosome Location chr6:24659748-24659749
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24646800-24662400 Weak transcription Right Ventricle heart
2 chr6:24646800-24662600 Weak transcription Spleen Spleen
3 chr6:24646800-24666000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:24647000-24662200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:24647000-24662400 Weak transcription Lung lung
6 chr6:24647000-24662600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr6:24647000-24666400 Weak transcription Esophagus oesophagus
8 chr6:24647200-24663400 Weak transcription Fetal Kidney kidney
9 chr6:24649400-24664800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr6:24649400-24665200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr6:24650000-24663600 Strong transcription Dnd41 blood
12 chr6:24650000-24665000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr6:24651000-24659800 Strong transcription Primary B cells from peripheral blood blood
14 chr6:24652400-24662800 Weak transcription Psoas Muscle Psoas
15 chr6:24653400-24662600 Weak transcription NHLF lung
16 chr6:24653600-24660000 Weak transcription Rectal Smooth Muscle rectum
17 chr6:24653800-24662200 Weak transcription Fetal Stomach stomach
18 chr6:24653800-24662200 Weak transcription Ovary ovary
19 chr6:24653800-24662400 Weak transcription Colonic Mucosa Colon
20 chr6:24653800-24662600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:24653800-24663800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr6:24653800-24666200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:24654000-24662600 Weak transcription HSMMtube muscle
24 chr6:24654000-24663200 Weak transcription Fetal Brain Male brain
25 chr6:24654000-24665200 Weak transcription Placenta Amnion Placenta Amnion
26 chr6:24654200-24661600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:24654200-24661600 Weak transcription Brain Hippocampus Middle brain
28 chr6:24654200-24662200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr6:24654200-24662400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr6:24654200-24662400 Weak transcription Brain Cingulate Gyrus brain
31 chr6:24654200-24663400 Weak transcription Brain Anterior Caudate brain
32 chr6:24654200-24664400 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr6:24654200-24665000 Weak transcription Brain Substantia Nigra brain
34 chr6:24654200-24665000 Weak transcription Fetal Lung lung
35 chr6:24654400-24662200 Weak transcription Fetal Brain Female brain
36 chr6:24654400-24662400 Weak transcription Stomach Smooth Muscle stomach
37 chr6:24654400-24663200 Weak transcription Brain Angular Gyrus brain
38 chr6:24654400-24665200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr6:24655000-24662600 Weak transcription Liver Liver
40 chr6:24655400-24665000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:24656000-24662600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr6:24656000-24662800 Weak transcription Pancreas Pancrea
43 chr6:24656000-24663000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr6:24656000-24663600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr6:24656000-24663800 Strong transcription Fetal Thymus thymus
46 chr6:24656200-24662200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr6:24656200-24662200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:24656200-24662400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr6:24656200-24662400 Weak transcription Left Ventricle heart
50 chr6:24656200-24662600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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