Variant report

Variant	rs1736891
Chromosome Location	chr6:28187101-28187102
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GABPA	chr6:28186341-28187126	SK-N-SH	brain:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
2	POLR2A	chr6:28186130-28187136	HepG2	liver:	n/a	n/a
3	TCF12	chr6:28186328-28187134	A549	lung:	n/a	chr6:28186860-28186867 chr6:28186625-28186635
4	POLR2A	chr6:28185956-28187137	Hela-S3	cervix:	n/a	n/a
5	ARID3A	chr6:28186795-28187113	HepG2	liver:	n/a	n/a
6	MXI1	chr6:28186333-28187120	GM12878	blood:	n/a	n/a
7	E2F6	chr6:28186339-28187250	A549	lung:	n/a	chr6:28186865-28186877 chr6:28186765-28186774 chr6:28186758-28186767
8	E2F6	chr6:28186373-28187157	H1-hESC	embryonic stem cell:	n/a	chr6:28186865-28186877 chr6:28186765-28186774 chr6:28186758-28186767
9	POLR2A	chr6:28186116-28187123	K562	blood:	n/a	n/a
10	POLR2A	chr6:28186251-28187103	U87	brain:	n/a	n/a
11	CUX1	chr6:28186874-28187183	K562	blood:	n/a	n/a
12	MAX	chr6:28186367-28187102	A549	lung:	n/a	chr6:28186753-28186763
13	POLR2A	chr6:28186321-28187185	PFSK-1	brain:	n/a	n/a
14	MAX	chr6:28186405-28187161	HCT-116	colon:	n/a	chr6:28186753-28186763
15	E2F6	chr6:28186422-28187126	H1-hESC	embryonic stem cell:	n/a	chr6:28186865-28186877 chr6:28186765-28186774 chr6:28186758-28186767
16	E2F6	chr6:28186415-28187103	K562	blood:	n/a	chr6:28186865-28186877 chr6:28186765-28186774 chr6:28186758-28186767
17	GABPA	chr6:28186220-28187102	A549	lung:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
18	GABPA	chr6:28186194-28187133	MCF-7	breast:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
19	POLR2A	chr6:28186251-28187109	U87	brain:	n/a	n/a
20	ARID3A	chr6:28186954-28187108	K562	blood:	n/a	n/a
21	MAX	chr6:28186137-28187157	HepG2	liver:	n/a	chr6:28186753-28186763
22	SETDB1	chr6:28186838-28187124	U2OS	brain:	n/a	n/a
23	PML	chr6:28186333-28187142	K562	blood:	n/a	chr6:28186840-28186848
24	POLR2A	chr6:28186303-28187142	SK-N-MC	brain:	n/a	n/a
25	GABPA	chr6:28186279-28187120	SK-N-SH	brain:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
26	POLR2A	chr6:28186484-28187111	MCF10A-Er-Src	breast:	n/a	n/a
27	MAX	chr6:28186483-28187173	MCF-7	breast:	n/a	chr6:28186753-28186763
28	MAX	chr6:28186049-28187145	HepG2	liver:	n/a	chr6:28186753-28186763
29	POLR2A	chr6:28186241-28187115	HUVEC	blood vessel:	n/a	n/a
30	GABPA	chr6:28186059-28187392	MCF-7	breast:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
31	MAX	chr6:28186546-28187154	ECC-1	luminal epithelium:	n/a	chr6:28186753-28186763
32	HCFC1	chr6:28186131-28187242	Hela-S3	cervix:	n/a	n/a
33	POLR2A	chr6:28186248-28187118	ProgFib	skin:	n/a	n/a
34	GABPA	chr6:28186339-28187146	HL-60	blood:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
35	MAX	chr6:28186218-28187102	A549	lung:	n/a	chr6:28186753-28186763
36	POLR2A	chr6:28186348-28187107	HUVEC	blood vessel:	n/a	n/a
37	GABPA	chr6:28186214-28187137	A549	lung:	n/a	chr6:28186758-28186767 chr6:28186710-28186719
38	MAX	chr6:28186301-28187171	HCT-116	colon:	n/a	chr6:28186753-28186763
39	PML	chr6:28186210-28187199	GM12878	blood:	n/a	chr6:28186840-28186848

No.	Distal block	Cell Line	Cell type
1	chr6:28184931..28189194-chr6:28190077..28194573,12	MCF-7	breast:
2	chr6:28184339..28187958-chr6:28190844..28194750,7	MCF-7	breast:
3	chr6:28182735..28195387-chr6:28315960..28325841,32	K562	blood:
4	chr6:28108272..28111912-chr6:28184259..28187979,3	MCF-7	breast:
5	chr6:28143030..28145517-chr6:28186267..28188999,2	K562	blood:
6	chr6:28186853..28189269-chr6:28360764..28363379,2	K562	blood:
7	chr6:28185564..28187470-chr6:28218621..28220714,2	MCF-7	breast:
8	chr6:28186992..28188596-chr6:28234642..28237014,2	K562	blood:
9	chr6:28184789..28191313-chr6:28230652..28235913,7	K562	blood:
10	chr6:28186460..28191177-chr6:28246836..28252039,7	K562	blood:
11	chr6:28186877..28189778-chr6:28366321..28368559,2	K562	blood:
12	chr6:28183629..28195178-chr6:28316250..28325659,29	K562	blood:
13	chr6:28100317..28107200-chr6:28184436..28191088,8	MCF-7	breast:
14	chr6:28104139..28106070-chr6:28185714..28187223,2	MCF-7	breast:
15	chr6:28102723..28113786-chr6:28183725..28194756,41	K562	blood:
16	chr6:27857437..27861183-chr6:28187100..28189751,4	K562	blood:
17	chr6:28135337..28137302-chr6:28186822..28190274,4	K562	blood:
18	chr6:27775362..27779371-chr6:28186093..28189957,4	K562	blood:
19	chr6:28184981..28190782-chr6:28297491..28307222,23	K562	blood:
20	chr6:28103775..28113920-chr6:28177995..28190115,32	K562	blood:
21	chr6:28182366..28191375-chr6:28300021..28306741,17	K562	blood:
22	chr6:27856777..27859583-chr6:28186890..28189718,3	K562	blood:
23	chr6:27860430..27862717-chr6:28186992..28190210,3	K562	blood:

Variant related genes	Relation type
TOB2P1	TF binding region
ENSG00000216901	Chromatin interaction
ENSG00000235109	Chromatin interaction
ENSG00000261839	Chromatin interaction
ENSG00000187626	Chromatin interaction
ENSG00000233224	Chromatin interaction
ENSG00000197153	Chromatin interaction
ENSG00000158691	Chromatin interaction
ENSG00000203813	Chromatin interaction
ENSG00000197062	Chromatin interaction
ENSG00000269293	Chromatin interaction
ENSG00000137185	Chromatin interaction
ENSG00000196747	Chromatin interaction
ENSG00000185130	Chromatin interaction
ENSG00000198315	Chromatin interaction
ENSG00000189298	Chromatin interaction
ENSG00000196331	Chromatin interaction
ENSG00000137338	Chromatin interaction

Extended variants
information (count: 63 )
Associated
traits (count: 35 )

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs1005125	0.87[CEU][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes]
rs1052215	1.00[ASW][hapmap];0.92[CEU][hapmap];0.91[CHB][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.83[TSI][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes]
rs1124132	0.80[EUR][1000 genomes]
rs1150668	0.88[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes]
rs1150670	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1150679	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1150686	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1150690	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1150691	0.83[CHB][hapmap]
rs1150694	0.90[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1150705	0.95[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1150707	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1150709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1150711	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.88[TSI][hapmap];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1150716	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1150718	0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap]
rs1150721	0.95[CHB][hapmap];1.00[YRI][hapmap]
rs1150724	0.91[ASW][hapmap];0.95[CHB][hapmap];0.82[CHD][hapmap];0.86[JPT][hapmap];0.97[MKK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap]
rs1150726	0.91[ASW][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap];0.97[MKK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap];0.90[ASN][1000 genomes]
rs12214383	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.97[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1225618	0.83[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap];0.96[MEX][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1225710	1.00[ASW][hapmap];0.96[CEU][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1225715	0.83[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.88[CHD][hapmap];0.90[JPT][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1233660	0.86[AFR][1000 genomes]
rs1233713	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13408	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];1.00[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs149956	0.92[CEU][hapmap];0.80[JPT][hapmap];0.82[EUR][1000 genomes]
rs149963	0.82[AFR][1000 genomes]
rs149976	1.00[ASW][hapmap];0.92[CEU][hapmap];0.80[JPT][hapmap];1.00[MKK][hapmap];0.83[TSI][hapmap];0.82[AFR][1000 genomes]
rs1531681	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1654774	0.81[ASW][hapmap];0.89[CEU][hapmap];0.84[CHD][hapmap];0.85[JPT][hapmap];0.87[MEX][hapmap];0.84[MKK][hapmap];0.84[TSI][hapmap];0.80[AMR][1000 genomes]
rs1736895	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1736904	0.83[CHB][hapmap]
rs1778484	0.91[ASW][hapmap];0.91[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.97[MKK][hapmap];0.85[TSI][hapmap];0.88[ASN][1000 genomes]
rs1997660	0.91[ASW][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes]
rs2021826	0.90[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2023493	0.80[EUR][1000 genomes]
rs203869	0.96[CEU][hapmap];0.85[JPT][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs203878	1.00[ASW][hapmap];0.96[CEU][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs213236	0.92[CEU][hapmap];0.81[EUR][1000 genomes]
rs213237	0.92[CEU][hapmap];0.80[MEX][hapmap];0.81[EUR][1000 genomes]
rs213238	0.92[CEU][hapmap];0.85[JPT][hapmap]
rs213240	0.96[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.93[TSI][hapmap];0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2142730	0.83[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.87[GIH][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2394049	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2531825	0.92[CEU][hapmap];0.80[MEX][hapmap]
rs2531832	0.80[EUR][1000 genomes]
rs2622320	0.96[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap]
rs2622322	0.90[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2791333	0.90[ASW][hapmap];0.96[CEU][hapmap];0.83[CHD][hapmap];0.87[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2859348	0.81[CEU][hapmap];0.86[CHB][hapmap]
rs34024998	0.87[EUR][1000 genomes]
rs4713158	0.88[AMR][1000 genomes]
rs707907	0.91[ASW][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs7206	0.91[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs853683	0.91[ASW][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes]
rs853684	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.87[GIH][hapmap];0.86[JPT][hapmap];0.96[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs853690	0.91[ASW][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes]
rs853693	0.91[ASW][hapmap];0.95[CHB][hapmap];0.84[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes]
rs9301	1.00[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.85[CHD][hapmap];0.86[GIH][hapmap];0.80[JPT][hapmap];0.88[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9368565	0.81[EUR][1000 genomes]
rs9468333	0.91[ASW][hapmap];0.95[CHB][hapmap];0.85[CHD][hapmap];0.86[JPT][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830620	chr6:28173997-28348033	Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	diseases

mRNA abundance (count:35)

SNP	Gene	Cis/trans	Tissue	Source
rs1736891	ZNF323	cis	parietal	SCAN
rs1736891	TRIM27	cis	Skin Sun Exposed Lower leg	GTEx
rs1736891	ZSCAN23	cis	Muscle Skeletal	GTEx
rs1736891	ZNF187	cis	cerebellum	SCAN
rs1736891	ZNF323	cis	cerebellum	SCAN
rs1736891	RP5-874C20.3	cis	Nerve Tibial	GTEx
rs1736891	RP5-874C20.3	cis	Thyroid	GTEx
rs1736891	BTN3A2	Cis_chr	lymphoblastoid	RTeQTL
rs1736891	AL022393.7	cis	Muscle Skeletal	GTEx
rs1736891	ZSCAN31	cis	Esophagus Muscularis	GTEx
rs1736891	AL022393.7	cis	lung	GTEx
rs1736891	ZNF192	cis	cerebellum	SCAN
rs1736891	ZSCAN23	cis	Stomach	GTEx
rs1736891	ZNF323	cis	Brain Pons	GTEx
rs1736891	BTN3A3	cis	parietal	SCAN
rs1736891	ZSCAN31	cis	Muscle Skeletal	GTEx
rs1736891	ZNF323	cis	Cerebellum	GTEx
rs1736891	ZSCAN12	Cis_1M	lymphoblastoid	RTeQTL
rs1736891	ZSCAN23	cis	parietal	SCAN
rs1736891	AL022393.7	cis	Artery Tibial	GTEx
rs1736891	ZNF323	cis	Frontal Cortex	GTEx
rs1736891	ZSCAN31	cis	lung	GTEx
rs1736891	ZKSCAN3	cis	cerebellum	SCAN
rs1736891	ZKSCAN3	cis	parietal	SCAN
rs1736891	ZSCAN31	cis	Thyroid	GTEx
rs1736891	NKAPL	cis	parietal	SCAN
rs1736891	RP5-874C20.3	cis	Esophagus Muscularis	GTEx
rs1736891	AL022393.7	cis	Nerve Tibial	GTEx
rs1736891	ZSCAN23	cis	lung	GTEx
rs1736891	ZSCAN23	cis	Artery Tibial	GTEx
rs1736891	ZSCAN23	cis	Adipose Subcutaneous	GTEx
rs1736891	AL022393.7	cis	Heart Left Ventricle	GTEx
rs1736891	ZNF323	cis	Temporal Cortex	GTEx
rs1736891	ZSCAN23	cis	cerebellum	SCAN
rs1736891	AL022393.7	cis	Esophagus Muscularis	GTEx

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28185600-28187400	Active TSS	Stomach Smooth Muscle	stomach
2	chr6:28185800-28187200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
3	chr6:28186000-28187200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
4	chr6:28186000-28187200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
5	chr6:28186000-28187200	Active TSS	Muscle Satellite Cultured Cells	--
6	chr6:28186000-28187200	Bivalent/Poised TSS	Brain Germinal Matrix	brain
7	chr6:28186000-28187200	Active TSS	NHLF	lung
8	chr6:28186000-28187200	Active TSS	Osteobl	bone
9	chr6:28186200-28187200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr6:28186200-28187200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
11	chr6:28186200-28187200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:28186200-28187200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr6:28186200-28187200	Active TSS	Aorta	Aorta
14	chr6:28186200-28187200	Active TSS	Brain Hippocampus Middle	brain
15	chr6:28186200-28187200	Bivalent/Poised TSS	Fetal Brain Female	brain
16	chr6:28186200-28187200	Active TSS	Psoas Muscle	Psoas
17	chr6:28186200-28187400	Active TSS	Breast Myoepithelial Primary Cells	Breast
18	chr6:28186400-28187200	Active TSS	ES-I3 Cell Line	embryonic stem cell
19	chr6:28186400-28187200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
20	chr6:28186400-28187200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr6:28186400-28187200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
22	chr6:28186400-28187200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr6:28186400-28187200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr6:28186400-28187200	Active TSS	Brain Anterior Caudate	brain
25	chr6:28186400-28187200	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
26	chr6:28186400-28187200	Active TSS	Brain Inferior Temporal Lobe	brain
27	chr6:28186400-28187200	Active TSS	Brain Substantia Nigra	brain
28	chr6:28186400-28187200	Active TSS	Colon Smooth Muscle	Colon
29	chr6:28186400-28187200	Active TSS	Duodenum Mucosa	Duodenum
30	chr6:28186400-28187200	Active TSS	Duodenum Smooth Muscle	Duodenum
31	chr6:28186400-28187200	Active TSS	Pancreatic Islets	Pancreatic Islet
32	chr6:28186400-28187200	Active TSS	Right Atrium	heart
33	chr6:28186400-28187200	Active TSS	Skeletal Muscle Male	skeletal muscle
34	chr6:28186400-28187200	Active TSS	Skeletal Muscle Female	skeletal muscle
35	chr6:28186400-28187200	Active TSS	A549	lung
36	chr6:28186400-28187200	Active TSS	GM12878-XiMat	blood
37	chr6:28186400-28187200	Active TSS	HUVEC	blood vessel
38	chr6:28186400-28187200	Active TSS	NHDF-Ad	bronchial
39	chr6:28186400-28187200	Active TSS	NHEK	skin
40	chr6:28186400-28187400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr6:28186400-28187400	Active TSS	Rectal Mucosa Donor 29	rectum
42	chr6:28186400-28187400	Active TSS	Rectal Smooth Muscle	rectum
43	chr6:28186600-28187200	Bivalent/Poised TSS	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr6:28186600-28187200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr6:28186600-28187200	Bivalent/Poised TSS	Primary B cells from cord blood	blood
46	chr6:28186600-28187200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr6:28186600-28187200	Active TSS	Liver	Liver
48	chr6:28186600-28187200	Bivalent/Poised TSS	Fetal Muscle Trunk	muscle
49	chr6:28186600-28187200	Bivalent/Poised TSS	Fetal Muscle Leg	muscle
50	chr6:28186600-28187200	Bivalent/Poised TSS	Fetal Stomach	stomach

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