Variant report

Variant rs17393080
Chromosome Location chr3:99765026-99765027
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99713600-99787800 Weak transcription Primary T cells from cord blood blood
2 chr3:99741200-99766800 Weak transcription Right Ventricle heart
3 chr3:99742400-99766400 Weak transcription Aorta Aorta
4 chr3:99752200-99774600 Weak transcription Gastric stomach
5 chr3:99757800-99766800 Weak transcription Pancreas Pancrea
6 chr3:99759000-99766600 Weak transcription Fetal Muscle Trunk muscle
7 chr3:99759200-99766200 Weak transcription Primary hematopoietic stem cells blood
8 chr3:99759200-99766400 Enhancers Skeletal Muscle Male skeletal muscle
9 chr3:99759200-99768200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:99761200-99765600 Enhancers Primary B cells from cord blood blood
11 chr3:99761200-99766200 Enhancers Primary B cells from peripheral blood blood
12 chr3:99761800-99766600 Enhancers Primary monocytes fromperipheralblood blood
13 chr3:99761800-99766800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr3:99762000-99765600 Weak transcription HepG2 liver
15 chr3:99762000-99766400 Weak transcription H1 Cell Line embryonic stem cell
16 chr3:99762000-99766600 Enhancers HSMMtube muscle
17 chr3:99762000-99767200 Enhancers NHDF-Ad bronchial
18 chr3:99762000-99767600 Enhancers HSMM muscle
19 chr3:99762000-99778200 Weak transcription Ovary ovary
20 chr3:99762200-99765600 Enhancers GM12878-XiMat blood
21 chr3:99762200-99765800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr3:99762200-99766600 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr3:99763000-99767600 Enhancers NHLF lung
24 chr3:99763600-99767200 Enhancers Placenta Placenta
25 chr3:99763800-99765400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr3:99763800-99766200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr3:99763800-99767400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:99764000-99766000 Enhancers Monocytes-CD14+_RO01746 blood
29 chr3:99764000-99766200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:99764000-99766600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr3:99764000-99767200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr3:99764200-99766400 Enhancers Skeletal Muscle Female skeletal muscle
33 chr3:99764200-99767200 Enhancers HUVEC blood vessel
34 chr3:99764200-99767400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:99764200-99767400 Enhancers NH-A brain
36 chr3:99764400-99765200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr3:99764400-99765200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr3:99764400-99765800 Enhancers Left Ventricle heart
39 chr3:99764400-99765800 Enhancers Hela-S3 cervix
40 chr3:99764400-99766000 Enhancers Duodenum Smooth Muscle Duodenum
41 chr3:99764400-99766400 Enhancers Rectal Smooth Muscle rectum
42 chr3:99764400-99766400 Enhancers A549 lung
43 chr3:99764400-99766600 Enhancers Colon Smooth Muscle Colon
44 chr3:99764400-99766600 Enhancers Osteobl bone
45 chr3:99764400-99766800 Enhancers NHEK skin
46 chr3:99764400-99767000 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr3:99764400-99767200 Enhancers Muscle Satellite Cultured Cells --
48 chr3:99764400-99767600 Enhancers Fetal Muscle Leg muscle
49 chr3:99764600-99765200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:99764600-99765200 Enhancers Brain Cingulate Gyrus brain

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