Variant report

Variant	rs17395484
Chromosome Location	chr2:21346489-21346490
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10514650	1.00[ASN][1000 genomes]
rs12713252	1.00[ASN][1000 genomes]
rs12993526	1.00[ASN][1000 genomes]
rs12995036	1.00[ASN][1000 genomes]
rs182584	1.00[ASN][1000 genomes]
rs312032	1.00[ASN][1000 genomes]
rs312034	1.00[ASN][1000 genomes]
rs312035	1.00[ASN][1000 genomes]
rs312037	1.00[ASN][1000 genomes]
rs312038	1.00[ASN][1000 genomes]
rs312039	1.00[ASN][1000 genomes]
rs312040	1.00[ASN][1000 genomes]
rs312044	1.00[ASN][1000 genomes]
rs35127135	1.00[ASN][1000 genomes]
rs72898450	1.00[ASN][1000 genomes]
rs72898452	1.00[ASN][1000 genomes]
rs72898454	1.00[ASN][1000 genomes]
rs72898467	1.00[ASN][1000 genomes]
rs7601166	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873728	chr2:21250914-21460786	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21346400-21346600	Active TSS	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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