Variant report

Variant	rs7601166
Chromosome Location	chr2:21534094-21534095
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10514650	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12713252	1.00[ASN][1000 genomes]
rs12993526	1.00[ASN][1000 genomes]
rs12995036	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17395484	1.00[ASN][1000 genomes]
rs182584	1.00[ASN][1000 genomes]
rs312032	1.00[ASN][1000 genomes]
rs312034	1.00[ASN][1000 genomes]
rs312035	1.00[ASN][1000 genomes]
rs312037	1.00[ASN][1000 genomes]
rs312038	1.00[ASN][1000 genomes]
rs312039	1.00[ASN][1000 genomes]
rs312040	1.00[ASN][1000 genomes]
rs312044	1.00[ASN][1000 genomes]
rs35127135	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72898450	1.00[ASN][1000 genomes]
rs72898452	1.00[ASN][1000 genomes]
rs72898454	1.00[ASN][1000 genomes]
rs72898467	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011486	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv535602	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1003630	chr2:21521637-21546859	Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21513000-21538200	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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