The 2.0 version of rSNPBase

Variant report

Variant rs17428551
Chromosome Location chr2:9723095-9723096
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:9696800-9767600 Weak transcription Gastric stomach
2 chr2:9697200-9723800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr2:9697400-9725000 Weak transcription Brain Hippocampus Middle brain
4 chr2:9697400-9729800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:9697800-9723600 Weak transcription Primary B cells from cord blood blood
6 chr2:9699600-9725600 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:9705400-9723600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr2:9705400-9723600 Weak transcription Colonic Mucosa Colon
9 chr2:9706000-9733600 Weak transcription Pancreas Pancrea
10 chr2:9706200-9727800 Weak transcription Rectal Smooth Muscle rectum
11 chr2:9706200-9728000 Weak transcription Psoas Muscle Psoas
12 chr2:9706400-9723600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:9706400-9725000 Weak transcription Colon Smooth Muscle Colon
14 chr2:9706400-9734200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:9710800-9723800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:9713400-9723400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:9713800-9723400 Weak transcription Hela-S3 cervix
18 chr2:9713800-9723400 Weak transcription HSMM muscle
19 chr2:9714000-9723600 Weak transcription NHLF lung
20 chr2:9714200-9723600 Weak transcription Brain Substantia Nigra brain
21 chr2:9714200-9725200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:9714400-9723400 Weak transcription Placenta Placenta
23 chr2:9714400-9723400 Weak transcription HMEC breast
24 chr2:9714600-9723400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr2:9714800-9723800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr2:9715000-9723400 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr2:9715000-9723600 Weak transcription GM12878-XiMat blood
28 chr2:9715000-9723600 Weak transcription NH-A brain
29 chr2:9715000-9735200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr2:9715800-9723600 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:9715800-9725600 Weak transcription Left Ventricle heart
32 chr2:9716000-9730000 Weak transcription Right Ventricle heart
33 chr2:9716400-9723600 Weak transcription Primary T cells from cord blood blood
34 chr2:9717000-9723600 Weak transcription Brain Germinal Matrix brain
35 chr2:9717200-9725200 Weak transcription Thymus Thymus
36 chr2:9717600-9723600 Weak transcription Primary B cells from peripheral blood blood
37 chr2:9717600-9723600 Weak transcription Duodenum Mucosa Duodenum
38 chr2:9717600-9723600 Weak transcription Fetal Lung lung
39 chr2:9717600-9734800 Weak transcription Spleen Spleen
40 chr2:9718000-9725000 Weak transcription K562 blood
41 chr2:9718000-9731600 Weak transcription Fetal Heart heart
42 chr2:9718200-9723400 Weak transcription Dnd41 blood
43 chr2:9718200-9725200 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr2:9718600-9723600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr2:9718800-9723400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:9718800-9723600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr2:9718800-9723800 Weak transcription Primary hematopoietic stem cells blood
48 chr2:9718800-9725000 Weak transcription Fetal Kidney kidney
49 chr2:9719200-9723400 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr2:9719200-9747800 Weak transcription Lung lung

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Last update: Aug 31, 2015