The 2.0 version of rSNPBase

Variant report

Variant rs17471252
Chromosome Location chr15:77738682-77738683
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77714000-77748600 Weak transcription Placenta Placenta
2 chr15:77714400-77739200 Weak transcription Right Atrium heart
3 chr15:77714400-77741600 Weak transcription Fetal Thymus thymus
4 chr15:77714800-77739200 Weak transcription Fetal Intestine Small intestine
5 chr15:77715000-77740600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr15:77716400-77741400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr15:77716800-77742600 Weak transcription Hela-S3 cervix
8 chr15:77717000-77754400 Weak transcription K562 blood
9 chr15:77717200-77739400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr15:77720000-77739400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr15:77720200-77743000 Weak transcription Primary B cells from cord blood blood
12 chr15:77727200-77741200 Weak transcription Fetal Stomach stomach
13 chr15:77727400-77747800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr15:77728200-77746200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr15:77729200-77740600 Weak transcription Fetal Muscle Leg muscle
16 chr15:77729400-77747200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr15:77729600-77748000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr15:77729600-77749200 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr15:77729800-77740600 Weak transcription Primary B cells from peripheral blood blood
20 chr15:77729800-77747200 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr15:77730400-77748600 Weak transcription Primary T cells fromperipheralblood blood
22 chr15:77730600-77740200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr15:77730600-77758800 Weak transcription Lung lung
24 chr15:77733200-77739600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr15:77733200-77744600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr15:77733200-77748000 Weak transcription HMEC breast
27 chr15:77733200-77749200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr15:77733200-77750200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr15:77733400-77741600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr15:77733400-77746800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr15:77733400-77747000 Weak transcription NH-A brain
32 chr15:77733400-77747000 Weak transcription NHDF-Ad bronchial
33 chr15:77733600-77739400 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr15:77733600-77741600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr15:77733600-77742000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:77733600-77742000 Weak transcription HSMM muscle
37 chr15:77734000-77745000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr15:77734200-77739200 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr15:77734400-77740600 Weak transcription Stomach Smooth Muscle stomach
40 chr15:77734600-77739200 Weak transcription Duodenum Mucosa Duodenum
41 chr15:77734600-77739200 Weak transcription A549 lung
42 chr15:77734600-77739400 Weak transcription Stomach Mucosa stomach
43 chr15:77734600-77746400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr15:77734800-77739200 Weak transcription GM12878-XiMat blood
45 chr15:77734800-77739400 Weak transcription Liver Liver
46 chr15:77735000-77739200 Weak transcription Adipose Nuclei Adipose
47 chr15:77735200-77739200 Weak transcription Primary T cells from cord blood blood
48 chr15:77735200-77741600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr15:77735200-77742200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:77735200-77742800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015