Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs16878821	1.00[EUR][1000 genomes]
rs1924993	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59675093	1.00[EUR][1000 genomes]
rs59931512	1.00[EUR][1000 genomes]
rs61271016	1.00[EUR][1000 genomes]
rs6902534	1.00[EUR][1000 genomes]
rs6924438	1.00[EUR][1000 genomes]
rs6931146	1.00[EUR][1000 genomes]
rs73431717	1.00[EUR][1000 genomes]
rs73431726	1.00[EUR][1000 genomes]
rs73431759	1.00[EUR][1000 genomes]
rs73431775	1.00[EUR][1000 genomes]
rs73474745	1.00[EUR][1000 genomes]
rs73474755	1.00[EUR][1000 genomes]
rs73474763	1.00[EUR][1000 genomes]
rs73485275	1.00[EUR][1000 genomes]
rs73485281	1.00[EUR][1000 genomes]
rs73485283	1.00[EUR][1000 genomes]
rs73485296	1.00[EUR][1000 genomes]
rs7751901	1.00[EUR][1000 genomes]
rs7774729	1.00[EUR][1000 genomes]
rs9918455	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949690	chr6:48595821-49289855	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv2755862	chr6:49081541-49298041	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:49221400-49223400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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