Variant report

Variant rs17501122
Chromosome Location chr2:98950884-98950885
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98948400-98951400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:98948800-98952800 Enhancers Cortex derived primary cultured neurospheres brain
3 chr2:98949000-98953200 Enhancers Brain Germinal Matrix brain
4 chr2:98949200-98952000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr2:98949400-98951200 Enhancers NHDF-Ad bronchial
6 chr2:98949400-98951600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr2:98949600-98951200 Enhancers Rectal Smooth Muscle rectum
8 chr2:98949600-98952200 Enhancers H1 Cell Line embryonic stem cell
9 chr2:98950000-98951000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:98950000-98951000 Enhancers Fetal Brain Female brain
11 chr2:98950000-98951000 Enhancers HSMMtube muscle
12 chr2:98950000-98951200 Enhancers H9 Cell Line embryonic stem cell
13 chr2:98950000-98951800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr2:98950000-98952000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:98950000-98952000 Enhancers NHLF lung
16 chr2:98950200-98951400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:98950200-98951600 Enhancers A549 lung
18 chr2:98950200-98951600 Enhancers HMEC breast
19 chr2:98950200-98951600 Enhancers NHEK skin
20 chr2:98950200-98951800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr2:98950200-98951800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
22 chr2:98950200-98952000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:98950400-98951000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
24 chr2:98950400-98951000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:98950400-98951000 Enhancers Fetal Brain Male brain
26 chr2:98950400-98951400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:98950400-98951600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
28 chr2:98950400-98951600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:98950400-98951800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
30 chr2:98950600-98951000 Enhancers Duodenum Smooth Muscle Duodenum
31 chr2:98950600-98951200 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr2:98950600-98951400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:98950600-98951400 Enhancers Colon Smooth Muscle Colon
34 chr2:98950600-98951600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:98950600-98951600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
36 chr2:98950600-98951600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr2:98950800-98951200 Enhancers Muscle Satellite Cultured Cells --
38 chr2:98950800-98951200 Enhancers HSMM muscle
39 chr2:98950800-98951200 Enhancers NH-A brain
40 chr2:98950800-98951200 Enhancers Osteobl bone
41 chr2:98950800-98951400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:98950800-98951400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
43 chr2:98950800-98951400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:98950800-98951600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
45 chr2:98950800-98951600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:98950800-98952000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:98950800-98952000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:98950800-98952600 Weak transcription Brain Cingulate Gyrus brain
49 chr2:98950800-98953200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:98950800-98956000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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