Variant report

Variant rs17533974
Chromosome Location chr6:11921997-11921998
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11918000-11922200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
2 chr6:11918200-11922200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr6:11918200-11922200 Enhancers HSMMtube muscle
4 chr6:11918400-11922400 Enhancers NHEK skin
5 chr6:11918400-11927800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:11919000-11922200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:11919400-11922200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:11919400-11922200 Enhancers Hela-S3 cervix
9 chr6:11919400-11922200 Enhancers NHDF-Ad bronchial
10 chr6:11919400-11922200 Enhancers NHLF lung
11 chr6:11919400-11924400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:11919400-11927600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:11919400-11927800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:11920600-11922200 Enhancers Placenta Amnion Placenta Amnion
15 chr6:11920800-11922200 Enhancers Fetal Intestine Large intestine
16 chr6:11920800-11922200 Enhancers HMEC breast
17 chr6:11920800-11922200 Enhancers HSMM muscle
18 chr6:11920800-11922200 Enhancers NH-A brain
19 chr6:11920800-11922400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:11920800-11922400 Enhancers Muscle Satellite Cultured Cells --
21 chr6:11920800-11922400 Enhancers Osteobl bone
22 chr6:11921000-11922000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:11921000-11922200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:11921000-11922400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:11921200-11922000 Enhancers HUES64 Cell Line embryonic stem cell
26 chr6:11921200-11922200 Enhancers Rectal Mucosa Donor 31 rectum
27 chr6:11921200-11922200 Flanking Active TSS K562 blood
28 chr6:11921200-11923400 Enhancers Fetal Lung lung
29 chr6:11921600-11926000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr6:11921600-11926000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:11921600-11926200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr6:11921600-11926200 Weak transcription Esophagus oesophagus
33 chr6:11921600-11938600 Weak transcription Right Atrium heart
34 chr6:11921800-11922200 Enhancers A549 lung
35 chr6:11921800-11930200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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