Variant report

Variant	rs9394442
Chromosome Location	chr6:11979753-11979754
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs16872077	1.00[JPT][hapmap]
rs16872108	0.83[ASN][1000 genomes]
rs17533974	1.00[JPT][hapmap]
rs209778	1.00[JPT][hapmap]
rs61706528	0.87[ASN][1000 genomes]
rs6919575	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6928723	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7775818	0.88[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs9296224	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9296237	0.88[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs9349041	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9357253	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9366941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9380630	1.00[JPT][hapmap]
rs9380705	0.94[ASN][1000 genomes]
rs9380706	0.94[ASN][1000 genomes]
rs9394473	0.88[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11973200-11980200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:11979200-11983600	Weak transcription	K562	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links