The 2.0 version of rSNPBase

Variant report

Variant rs17587218
Chromosome Location chr13:30382587-30382588
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30363800-30385000 Weak transcription Left Ventricle heart
2 chr13:30365800-30383200 Weak transcription Ovary ovary
3 chr13:30373400-30383200 Weak transcription Small Intestine intestine
4 chr13:30374200-30383200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr13:30375400-30383200 Weak transcription Brain Cingulate Gyrus brain
6 chr13:30376200-30384200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr13:30376400-30383200 Weak transcription Brain Anterior Caudate brain
8 chr13:30376400-30383400 Weak transcription Gastric stomach
9 chr13:30376400-30386000 Enhancers Primary T helper cells PMA-I stimulated --
10 chr13:30376600-30383600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr13:30376600-30383800 Weak transcription Placenta Amnion Placenta Amnion
12 chr13:30376600-30383800 Weak transcription Right Atrium heart
13 chr13:30376600-30384000 Weak transcription Colon Smooth Muscle Colon
14 chr13:30376600-30385200 Weak transcription Lung lung
15 chr13:30376600-30385600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr13:30376600-30420600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr13:30376800-30383400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr13:30377200-30383600 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr13:30377400-30383200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr13:30377400-30390000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr13:30377600-30384400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr13:30377800-30384600 Weak transcription Osteobl bone
23 chr13:30378000-30391800 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr13:30378400-30383200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr13:30378800-30384800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr13:30379200-30383200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr13:30380200-30383600 Weak transcription Psoas Muscle Psoas
28 chr13:30380600-30384600 Enhancers Liver Liver
29 chr13:30380600-30386800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr13:30380800-30382600 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr13:30380800-30383200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr13:30380800-30383600 Weak transcription Brain Substantia Nigra brain
33 chr13:30381000-30383200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr13:30381000-30384200 Weak transcription Stomach Smooth Muscle stomach
35 chr13:30381000-30384600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr13:30381000-30384600 Weak transcription Rectal Smooth Muscle rectum
37 chr13:30381200-30385800 Enhancers Brain Angular Gyrus brain
38 chr13:30381400-30382600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr13:30381400-30384200 Weak transcription Brain Germinal Matrix brain
40 chr13:30381400-30384400 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr13:30381400-30385600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr13:30381400-30386600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr13:30381400-30386800 Enhancers Stomach Mucosa stomach
44 chr13:30381600-30383200 Weak transcription Fetal Intestine Large intestine
45 chr13:30381600-30383200 Weak transcription Pancreas Pancrea
46 chr13:30381600-30384200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr13:30381600-30384400 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr13:30381600-30384800 Enhancers Pancreatic Islets Pancreatic Islet
49 chr13:30381600-30390600 Weak transcription Primary B cells from peripheral blood blood
50 chr13:30381800-30382600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015