The 2.0 version of rSNPBase

Variant report

Variant rs17610893
Chromosome Location chr4:100742370-100742371
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100738800-100744400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr4:100739200-100744000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr4:100739400-100743800 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr4:100739600-100743800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr4:100739600-100745400 Weak transcription Esophagus oesophagus
6 chr4:100739800-100744400 Enhancers Primary T helper cells fromperipheralblood blood
7 chr4:100740000-100742400 Enhancers Primary hematopoietic stem cells blood
8 chr4:100740000-100744200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr4:100740000-100745000 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr4:100740000-100756600 Weak transcription Primary T cells fromperipheralblood blood
11 chr4:100740200-100744200 Enhancers Primary T helper cells PMA-I stimulated --
12 chr4:100740200-100745000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr4:100740600-100742400 Weak transcription HMEC breast
14 chr4:100740600-100743200 Weak transcription K562 blood
15 chr4:100740800-100744200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr4:100741000-100743200 Active TSS Right Atrium heart
17 chr4:100741000-100745200 Weak transcription Colon Smooth Muscle Colon
18 chr4:100741200-100742400 Genic enhancers NHEK skin
19 chr4:100741200-100743400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:100741200-100744800 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr4:100741400-100742800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr4:100741400-100743400 Weak transcription Spleen Spleen
23 chr4:100741400-100744800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:100741400-100756800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr4:100741400-100758200 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr4:100742000-100742400 Genic enhancers Primary monocytes fromperipheralblood blood
27 chr4:100742000-100742800 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr4:100742000-100742800 Active TSS Left Ventricle heart
29 chr4:100742000-100743400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:100742000-100744200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
31 chr4:100742000-100744200 Flanking Active TSS GM12878-XiMat blood
32 chr4:100742200-100742600 Genic enhancers Primary T cells from cord blood blood
33 chr4:100742200-100742600 Enhancers Sigmoid Colon Sigmoid Colon
34 chr4:100742200-100742800 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
35 chr4:100742200-100742800 Enhancers Duodenum Mucosa Duodenum
36 chr4:100742200-100743800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr4:100742200-100744000 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr4:100742200-100744200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
39 chr4:100742200-100744200 Enhancers Placenta Amnion Placenta Amnion
40 chr4:100742200-100745200 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015