Variant report
| Variant | rs17664238 |
|---|---|
| Chromosome Location | chr6:50021268-50021269 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
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rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs1324517 | 1.00[EUR][1000 genomes] |
| rs1324518 | 1.00[CEU][hapmap];1.00[EUR][1000 genomes] |
| rs17664201 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs55727781 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs55804491 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs55865419 | 1.00[EUR][1000 genomes] |
| rs56241857 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs626858 | 1.00[CEU][hapmap] |
| rs627990 | 1.00[CEU][hapmap] |
| rs7758921 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3388030 | chr6:50018893-50022691 | Enhancers | TF binding regionChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
