Variant report
Variant | rs17672161 |
---|---|
Chromosome Location | chr20:16433529-16433530 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr20:16392200-16453000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
2 | chr20:16400000-16440000 | Weak transcription | NHEK | skin |
3 | chr20:16405400-16434600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
4 | chr20:16408600-16439200 | Weak transcription | Brain Hippocampus Middle | brain |
5 | chr20:16409200-16439400 | Weak transcription | Rectal Smooth Muscle | rectum |
6 | chr20:16409200-16443600 | Weak transcription | Gastric | stomach |
7 | chr20:16410200-16437400 | Weak transcription | Esophagus | oesophagus |
8 | chr20:16410200-16455800 | Weak transcription | Duodenum Mucosa | Duodenum |
9 | chr20:16410200-16473200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
10 | chr20:16410600-16455400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
11 | chr20:16411200-16439200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
12 | chr20:16411200-16440000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
13 | chr20:16411200-16455200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
14 | chr20:16414800-16443600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
15 | chr20:16420200-16440000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
16 | chr20:16420400-16435400 | Weak transcription | Fetal Intestine Large | intestine |
17 | chr20:16420400-16453000 | Weak transcription | Left Ventricle | heart |
18 | chr20:16420800-16471400 | Weak transcription | Primary hematopoietic stem cells | blood |
19 | chr20:16422400-16435400 | Weak transcription | Fetal Intestine Small | intestine |
20 | chr20:16425200-16439400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
21 | chr20:16425200-16440000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
22 | chr20:16425800-16443400 | Weak transcription | Ovary | ovary |
23 | chr20:16426600-16439800 | Weak transcription | Adipose Nuclei | Adipose |
24 | chr20:16426800-16439400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
25 | chr20:16427200-16439400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
26 | chr20:16427600-16438200 | Weak transcription | HSMMtube | muscle |
27 | chr20:16429000-16443400 | Weak transcription | Psoas Muscle | Psoas |
28 | chr20:16429400-16440000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
29 | chr20:16431400-16443400 | Weak transcription | Pancreas | Pancrea |
30 | chr20:16431400-16454600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
31 | chr20:16431400-16455400 | Weak transcription | Fetal Lung | lung |
32 | chr20:16431400-16456000 | Weak transcription | Liver | Liver |
33 | chr20:16431400-16463000 | Weak transcription | Aorta | Aorta |
34 | chr20:16431400-16508200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
35 | chr20:16431600-16450800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
36 | chr20:16431800-16438600 | Weak transcription | Brain Anterior Caudate | brain |
37 | chr20:16431800-16439800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
38 | chr20:16431800-16458400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
39 | chr20:16431800-16462200 | Weak transcription | Primary T cells from cord blood | blood |
40 | chr20:16432400-16440000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
41 | chr20:16432600-16434800 | Enhancers | Primary neutrophils fromperipheralblood | blood |
42 | chr20:16432600-16440400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
43 | chr20:16433000-16438200 | Weak transcription | Fetal Muscle Leg | muscle |
44 | chr20:16433000-16456400 | Weak transcription | Primary B cells from cord blood | blood |