The 2.0 version of rSNPBase

Variant report

Variant rs17699526
Chromosome Location chr3:158427519-158427520
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:158390400-158428600 Weak transcription Brain Cingulate Gyrus brain
2 chr3:158390800-158429400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:158390800-158430200 Weak transcription Brain Hippocampus Middle brain
4 chr3:158390800-158430400 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:158390800-158430800 Weak transcription Right Ventricle heart
6 chr3:158390800-158430800 Weak transcription Stomach Mucosa stomach
7 chr3:158390800-158432800 Weak transcription Spleen Spleen
8 chr3:158390800-158444200 Weak transcription Gastric stomach
9 chr3:158390800-158445400 Weak transcription H1 Cell Line embryonic stem cell
10 chr3:158391000-158429200 Weak transcription Colon Smooth Muscle Colon
11 chr3:158391000-158430600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr3:158391000-158438800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr3:158397000-158429200 Weak transcription Ovary ovary
14 chr3:158397000-158443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr3:158397000-158448000 Weak transcription Thymus Thymus
16 chr3:158399600-158445400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr3:158400600-158429000 Weak transcription Brain Substantia Nigra brain
18 chr3:158403600-158438600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr3:158408400-158430200 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr3:158408400-158443000 Weak transcription HepG2 liver
21 chr3:158409000-158429800 Weak transcription Small Intestine intestine
22 chr3:158409800-158439000 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr3:158410800-158430400 Weak transcription Fetal Thymus thymus
24 chr3:158411600-158439400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:158412200-158440800 Weak transcription Rectal Smooth Muscle rectum
26 chr3:158412400-158439200 Weak transcription Fetal Kidney kidney
27 chr3:158415000-158440800 Weak transcription Colonic Mucosa Colon
28 chr3:158415800-158429600 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr3:158416000-158430800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr3:158416800-158428600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr3:158417600-158440600 Weak transcription Aorta Aorta
32 chr3:158420600-158429400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr3:158421000-158427800 Strong transcription Primary monocytes fromperipheralblood blood
34 chr3:158421600-158431200 Strong transcription Primary T cells from cord blood blood
35 chr3:158421800-158435600 Strong transcription Fetal Intestine Small intestine
36 chr3:158422600-158429400 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr3:158422800-158427600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr3:158423200-158431800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr3:158423800-158438800 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr3:158424000-158427800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
41 chr3:158424200-158446000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:158424600-158429200 Weak transcription Psoas Muscle Psoas
43 chr3:158424800-158427800 Strong transcription Liver Liver
44 chr3:158425000-158427800 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr3:158425000-158427800 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr3:158425000-158429400 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr3:158425000-158431000 Strong transcription Primary T cells fromperipheralblood blood
48 chr3:158425200-158427800 Strong transcription Duodenum Mucosa Duodenum
49 chr3:158425200-158429000 Strong transcription Primary B cells from peripheral blood blood
50 chr3:158425200-158431000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015