The 2.0 version of rSNPBase

Variant report

Variant rs56152025
Chromosome Location chr3:158436013-158436014
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:158390800-158444200 Weak transcription Gastric stomach
2 chr3:158390800-158445400 Weak transcription H1 Cell Line embryonic stem cell
3 chr3:158391000-158438800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr3:158397000-158443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr3:158397000-158448000 Weak transcription Thymus Thymus
6 chr3:158399600-158445400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:158403600-158438600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr3:158408400-158443000 Weak transcription HepG2 liver
9 chr3:158409800-158439000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr3:158411600-158439400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr3:158412200-158440800 Weak transcription Rectal Smooth Muscle rectum
12 chr3:158412400-158439200 Weak transcription Fetal Kidney kidney
13 chr3:158415000-158440800 Weak transcription Colonic Mucosa Colon
14 chr3:158417600-158440600 Weak transcription Aorta Aorta
15 chr3:158423800-158438800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr3:158424200-158446000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr3:158426600-158436600 Strong transcription Fetal Stomach stomach
18 chr3:158427600-158439000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:158427600-158440600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:158427800-158440400 Weak transcription Primary monocytes fromperipheralblood blood
21 chr3:158427800-158440600 Weak transcription Duodenum Mucosa Duodenum
22 chr3:158427800-158440800 Weak transcription Liver Liver
23 chr3:158427800-158440800 Weak transcription Esophagus oesophagus
24 chr3:158428000-158438800 Weak transcription Fetal Brain Female brain
25 chr3:158428600-158438800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr3:158429000-158440600 Weak transcription Primary B cells from peripheral blood blood
27 chr3:158429200-158438200 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr3:158429400-158436200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr3:158429400-158438200 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr3:158429600-158449000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:158429800-158440800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:158430600-158440800 Weak transcription Small Intestine intestine
33 chr3:158431000-158436200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:158431000-158438800 Weak transcription Primary T cells fromperipheralblood blood
35 chr3:158431000-158439600 Weak transcription H9 Cell Line embryonic stem cell
36 chr3:158431000-158439800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr3:158431000-158440600 Weak transcription Fetal Thymus thymus
38 chr3:158431000-158442000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr3:158431000-158442400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr3:158431000-158444200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:158431000-158445400 Weak transcription GM12878-XiMat blood
42 chr3:158431000-158449200 Weak transcription Brain Germinal Matrix brain
43 chr3:158431200-158439000 Weak transcription Primary T cells from cord blood blood
44 chr3:158431200-158445400 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr3:158431200-158445800 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr3:158431400-158439400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:158431400-158445400 Weak transcription Brain Inferior Temporal Lobe brain
48 chr3:158431400-158445400 Weak transcription Dnd41 blood
49 chr3:158431800-158436200 Weak transcription Fetal Heart heart
50 chr3:158432000-158445400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015