Variant report

Variant	rs17725971
Chromosome Location	chr2:74118201-74118202
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:74116934..74118843-chr2:74125346..74127751,2	K562	blood:

rs_ID	r²[population]
rs10188058	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes]
rs1025424	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11683738	1.00[CHB][hapmap]
rs11898903	1.00[CHB][hapmap]
rs12466586	1.00[CHB][hapmap]
rs12991192	1.00[CHB][hapmap]
rs12995468	1.00[CHB][hapmap]
rs13011961	1.00[CHB][hapmap]
rs13016198	1.00[CHB][hapmap]
rs1318987	1.00[CEU][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes]
rs17404009	1.00[CHB][hapmap]
rs17676291	1.00[CHB][hapmap]
rs2567601	1.00[JPT][hapmap]
rs2567603	1.00[JPT][hapmap]
rs35058061	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62150710	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6717896	1.00[CHB][hapmap]
rs7593050	1.00[CHB][hapmap]
rs870722	1.00[CHB][hapmap]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:74114800-74118400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:74115000-74118800	Enhancers	Colon Smooth Muscle	Colon
3	chr2:74115000-74119600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr2:74115000-74123600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr2:74116600-74119400	Enhancers	Rectal Smooth Muscle	rectum
6	chr2:74116800-74119400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr2:74117200-74121400	Weak transcription	Gastric	stomach
8	chr2:74117400-74118400	Bivalent Enhancer	NH-A	brain
9	chr2:74117600-74118400	Bivalent Enhancer	NHDF-Ad	bronchial
10	chr2:74117600-74118600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr2:74117600-74118600	Enhancers	HMEC	breast
12	chr2:74117600-74119600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr2:74117600-74120200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr2:74117800-74118400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr2:74117800-74118400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr2:74117800-74118400	Bivalent Enhancer	HepG2	liver
17	chr2:74117800-74118600	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr2:74117800-74119600	Enhancers	Fetal Stomach	stomach
19	chr2:74118000-74118400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr2:74118000-74118400	Enhancers	Stomach Smooth Muscle	stomach
21	chr2:74118000-74118800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr2:74118000-74120400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
23	chr2:74118200-74118800	Enhancers	NHLF	lung
24	chr2:74118200-74123400	Weak transcription	Brain Hippocampus Middle	brain
25	chr2:74118200-74123600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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