Variant report

Variant rs1778684
Chromosome Location chr1:145026264-145026265
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145015400-145030000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:145016800-145032600 Weak transcription Liver Liver
3 chr1:145016800-145032800 Weak transcription Spleen Spleen
4 chr1:145020600-145028000 Enhancers Brain Hippocampus Middle brain
5 chr1:145021000-145027800 Enhancers Brain Angular Gyrus brain
6 chr1:145021200-145026800 Enhancers Psoas Muscle Psoas
7 chr1:145023200-145026400 Enhancers Pancreatic Islets Pancreatic Islet
8 chr1:145023400-145028000 Weak transcription Rectal Smooth Muscle rectum
9 chr1:145023600-145027200 Enhancers Brain Germinal Matrix brain
10 chr1:145023600-145027600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
11 chr1:145023600-145027800 Enhancers Brain Substantia Nigra brain
12 chr1:145023800-145026600 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:145023800-145026600 Enhancers Osteobl bone
14 chr1:145023800-145027000 Enhancers Skeletal Muscle Female skeletal muscle
15 chr1:145023800-145027800 Enhancers Brain Cingulate Gyrus brain
16 chr1:145023800-145028000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:145023800-145028000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:145023800-145032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:145023800-145032800 Weak transcription Fetal Muscle Trunk muscle
20 chr1:145023800-145034000 Weak transcription Pancreas Pancrea
21 chr1:145024000-145028000 Weak transcription Fetal Stomach stomach
22 chr1:145024400-145026400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr1:145024400-145026400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:145024400-145026600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:145024400-145027400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr1:145024400-145027400 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:145024400-145028000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:145024400-145028400 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:145024600-145026400 Weak transcription Fetal Muscle Leg muscle
30 chr1:145024600-145026400 Weak transcription Placenta Placenta
31 chr1:145024600-145026400 Enhancers Skeletal Muscle Male skeletal muscle
32 chr1:145024600-145027600 Weak transcription Stomach Smooth Muscle stomach
33 chr1:145024600-145027800 Weak transcription Left Ventricle heart
34 chr1:145024600-145028000 Weak transcription H1 Cell Line embryonic stem cell
35 chr1:145024600-145028000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:145024600-145028800 Weak transcription Right Ventricle heart
37 chr1:145024800-145027800 Weak transcription Fetal Heart heart
38 chr1:145025000-145027200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:145025400-145026400 Enhancers NHDF-Ad bronchial
40 chr1:145025400-145030200 Weak transcription Adipose Nuclei Adipose
41 chr1:145025600-145026600 Enhancers K562 blood
42 chr1:145025600-145027200 Weak transcription NHLF lung
43 chr1:145025800-145026400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:145025800-145026600 Weak transcription Brain Anterior Caudate brain
45 chr1:145025800-145027200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:145025800-145027400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:145025800-145027800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:145025800-145027800 Weak transcription HMEC breast
49 chr1:145025800-145027800 Strong transcription HSMMtube muscle
50 chr1:145025800-145028200 Weak transcription NHEK skin

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