Variant report

Variant rs1625512
Chromosome Location chr1:145026435-145026436
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145015400-145030000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:145016800-145032600 Weak transcription Liver Liver
3 chr1:145016800-145032800 Weak transcription Spleen Spleen
4 chr1:145020600-145028000 Enhancers Brain Hippocampus Middle brain
5 chr1:145021000-145027800 Enhancers Brain Angular Gyrus brain
6 chr1:145021200-145026800 Enhancers Psoas Muscle Psoas
7 chr1:145023400-145028000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:145023600-145027200 Enhancers Brain Germinal Matrix brain
9 chr1:145023600-145027600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr1:145023600-145027800 Enhancers Brain Substantia Nigra brain
11 chr1:145023800-145026600 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:145023800-145026600 Enhancers Osteobl bone
13 chr1:145023800-145027000 Enhancers Skeletal Muscle Female skeletal muscle
14 chr1:145023800-145027800 Enhancers Brain Cingulate Gyrus brain
15 chr1:145023800-145028000 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:145023800-145028000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:145023800-145032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:145023800-145032800 Weak transcription Fetal Muscle Trunk muscle
19 chr1:145023800-145034000 Weak transcription Pancreas Pancrea
20 chr1:145024000-145028000 Weak transcription Fetal Stomach stomach
21 chr1:145024400-145026600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:145024400-145027400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:145024400-145027400 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:145024400-145028000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:145024400-145028400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:145024600-145027600 Weak transcription Stomach Smooth Muscle stomach
27 chr1:145024600-145027800 Weak transcription Left Ventricle heart
28 chr1:145024600-145028000 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:145024600-145028000 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr1:145024600-145028800 Weak transcription Right Ventricle heart
31 chr1:145024800-145027800 Weak transcription Fetal Heart heart
32 chr1:145025000-145027200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:145025400-145030200 Weak transcription Adipose Nuclei Adipose
34 chr1:145025600-145026600 Enhancers K562 blood
35 chr1:145025600-145027200 Weak transcription NHLF lung
36 chr1:145025800-145026600 Weak transcription Brain Anterior Caudate brain
37 chr1:145025800-145027200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:145025800-145027400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:145025800-145027800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:145025800-145027800 Weak transcription HMEC breast
41 chr1:145025800-145027800 Strong transcription HSMMtube muscle
42 chr1:145025800-145028200 Weak transcription NHEK skin
43 chr1:145025800-145028400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:145026000-145026600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:145026000-145027400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:145026000-145027400 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:145026000-145027600 Weak transcription HSMM muscle
48 chr1:145026000-145027800 Weak transcription Aorta Aorta
49 chr1:145026000-145028000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:145026000-145028400 Enhancers Fetal Brain Female brain

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