Variant report

Variant	rs2590092
Chromosome Location	chr1:145041137-145041138
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZMIZ1	chr1:145038485-145041708	K562	blood:	n/a	n/a
2	BACH1	chr1:145040155-145043641	K562	blood:	n/a	n/a
3	FOS	chr1:145041053-145041175	MCF10A-Er-Src	breast:	n/a	n/a
4	ZC3H11A	chr1:145038377-145043739	K562	blood:	n/a	n/a
5	RCOR1	chr1:145039029-145041250	HepG2	liver:	n/a	n/a
6	BRCA1	chr1:145040891-145041560	GM12878	blood:	n/a	n/a
7	TBL1XR1	chr1:145038330-145041797	K562	blood:	n/a	n/a
8	TCF7L2	chr1:145039014-145041436	PANC-1	pancreas:	n/a	chr1:145039218-145039234
9	CUX1	chr1:145040246-145041910	K562	blood:	n/a	n/a
10	FAM48A	chr1:145041062-145041896	GM12878	blood:	n/a	n/a
11	MXI1	chr1:145038150-145043822	SK-N-SH	brain:	n/a	n/a
12	UBTF	chr1:145040963-145041569	K562	blood:	n/a	n/a
13	MXI1	chr1:145038628-145041595	H1-hESC	embryonic stem cell:	n/a	n/a
14	MAZ	chr1:145038320-145041587	K562	blood:	n/a	n/a
15	NFE2	chr1:145040981-145041181	GM12878	blood:	n/a	n/a
16	MXI1	chr1:145041128-145043672	K562	blood:	n/a	n/a
17	RCOR1	chr1:145038335-145041586	K562	blood:	n/a	n/a
18	SIN3A	chr1:145038280-145041589	H1-hESC	embryonic stem cell:	n/a	chr1:145040398-145040411
19	GTF2F1	chr1:145040747-145041371	H1-hESC	embryonic stem cell:	n/a	n/a
20	RFX5	chr1:145038232-145041194	HepG2	liver:	n/a	chr1:145039967-145039980 chr1:145039967-145039981
21	CTCF	chr1:145040518-145041905	K562	blood:	n/a	n/a
22	JUN	chr1:145041017-145042646	H1-hESC	embryonic stem cell:	n/a	n/a
23	ARID3A	chr1:145040639-145043538	K562	blood:	n/a	n/a
24	SMC3	chr1:145038957-145041497	K562	blood:	n/a	chr1:145040117-145040131 chr1:145039486-145039494
25	ZNF143	chr1:145040299-145041583	Hela-S3	cervix:	n/a	n/a
26	ELK1	chr1:145040114-145041450	Hela-S3	cervix:	n/a	n/a
27	IRF3	chr1:145040989-145041592	GM12878	blood:	n/a	n/a
28	UBTF	chr1:145041026-145041592	K562	blood:	n/a	n/a
29	JUN	chr1:145038127-145043841	K562	blood:	n/a	chr1:145038750-145038761 chr1:145042901-145042909
30	BHLHE40	chr1:145038295-145041614	K562	blood:	n/a	n/a
31	SMC3	chr1:145038360-145041233	GM12878	blood:	n/a	chr1:145040117-145040131 chr1:145039486-145039494
32	BRF1	chr1:145040387-145041483	Hela-S3	cervix:	n/a	n/a
33	MYC	chr1:145039190-145041200	H1-hESC	embryonic stem cell:	n/a	n/a
34	TBL1XR1	chr1:145040297-145043605	K562	blood:	n/a	n/a
35	MXI1	chr1:145038180-145042692	IMR90	lung:	n/a	n/a
36	KAP1	chr1:145038245-145041701	HEK293	kidney:	n/a	chr1:145038826-145038834
37	RFX5	chr1:145040770-145041516	GM12878	blood:	n/a	n/a
38	RFX5	chr1:145040460-145043550	K562	blood:	n/a	n/a
39	REST	chr1:145038067-145041474	H1-neurons	neurons:	n/a	chr1:145040398-145040411
40	TEAD4	chr1:145038349-145041657	K562	blood:	n/a	n/a
41	MAZ	chr1:145040943-145041477	Hela-S3	cervix:	n/a	n/a
42	GATA1	chr1:145041088-145042671	PBDEFetal	blood:	n/a	chr1:145041146-145041157
43	ELK1	chr1:145040406-145041922	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:144993668..144997286-chr1:145038559..145041171,3	MCF-7	breast:
2	chr1:144532529..144536488-chr1:145037438..145042371,7	K562	blood:
3	chr1:144987747..144991931-chr1:145038647..145042138,3	MCF-7	breast:
4	chr1:144533474..144535721-chr1:145039954..145042434,2	K562	blood:
5	chr1:144995349..144995871-chr1:145040542..145041528,2	K562	blood:

Variant related genes	Relation type
PDE4DIP	TF binding region
RN7SKP88	TF binding region
ENSG00000268172	Chromatin interaction
ENSG00000201699	Chromatin interaction
ENSG00000178104	Chromatin interaction

Extended variants
information (count: 121 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10910730	0.83[YRI][hapmap]
rs1539655	1.00[YRI][hapmap]
rs1557243	1.00[YRI][hapmap]
rs1621108	0.83[YRI][hapmap]
rs1625512	0.83[YRI][hapmap]
rs1627675	0.83[YRI][hapmap]
rs1778142	0.83[YRI][hapmap]
rs1778568	1.00[YRI][hapmap]
rs1778603	1.00[YRI][hapmap]
rs1778753	0.83[YRI][hapmap]
rs1778759	0.83[YRI][hapmap]
rs2489083	0.83[YRI][hapmap]
rs2762723	1.00[YRI][hapmap]
rs2762863	0.83[YRI][hapmap]
rs2798895	0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1828275	chr1:144274482-145098718	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
2	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
3	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
4	nsv872212	chr1:144850451-145073750	Strong transcription Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
5	nsv1005230	chr1:144865627-145151820	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
6	esv1828244	chr1:144865627-145243316	Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
7	esv2753260	chr1:144873327-145129144	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
8	nsv872214	chr1:144875799-145195645	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
9	nsv821620	chr1:144885908-145095806	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
10	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
11	nsv872216	chr1:144894697-145041251	Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
12	esv1824264	chr1:144902232-145098718	Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
13	esv1828303	chr1:144902232-145098718	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
14	esv1831542	chr1:144902232-145098718	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
15	esv1843292	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
16	esv1850612	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
17	esv1819879	chr1:144902232-145287810	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
18	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
19	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
20	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
21	nsv870419	chr1:144912330-145113174	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
22	nsv1013214	chr1:144914802-145069306	Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
23	nsv821349	chr1:144916753-145090362	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	nsv824365	chr1:144916753-145090362	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
25	esv1818887	chr1:144919989-145074925	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
26	esv32934	chr1:144920018-145079815	Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
27	esv3387252	chr1:144922395-145093993	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
28	esv1814765	chr1:144923014-145074925	ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
29	esv1820235	chr1:144923014-145087821	Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
30	esv1805522	chr1:144938320-145104261	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
31	esv1846928	chr1:144938320-145104261	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
32	esv1815206	chr1:144940095-145082961	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
33	esv1815389	chr1:144940855-145080948	Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
34	esv1846259	chr1:144941990-145083949	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
35	esv1830107	chr1:144942423-145074925	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
36	esv1850767	chr1:144942423-145074925	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
37	esv1826390	chr1:144943140-145085418	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
38	esv1815951	chr1:144948280-145078168	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
39	esv1845217	chr1:144948280-145078168	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
40	esv1826769	chr1:144948280-145088893	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
41	esv19656	chr1:144948283-145083994	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
42	nsv8069	chr1:144948383-145081051	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
43	nsv1007674	chr1:144948956-145069306	Weak transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
44	nsv824376	chr1:144949067-145080191	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
45	esv1818816	chr1:144949949-145075125	Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
46	esv1819156	chr1:144949949-145075125	Genic enhancers Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
47	esv1829419	chr1:144949949-145075125	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
48	esv1831919	chr1:144949949-145075125	Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
49	esv1848630	chr1:144949949-145075125	Enhancers Flanking Active TSS Genic enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
50	esv1850050	chr1:144949949-145075125	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145038000-145041600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
2	chr1:145040000-145041200	Flanking Active TSS	Brain Germinal Matrix	brain
3	chr1:145040400-145041200	Enhancers	Ovary	ovary
4	chr1:145040400-145041200	Enhancers	Right Ventricle	heart
5	chr1:145040400-145041400	Bivalent Enhancer	Left Ventricle	heart
6	chr1:145040400-145041400	Enhancers	Right Atrium	heart
7	chr1:145040400-145041400	Enhancers	NHLF	lung
8	chr1:145040400-145041600	Bivalent Enhancer	Fetal Muscle Leg	muscle
9	chr1:145040400-145041800	Enhancers	Aorta	Aorta
10	chr1:145040400-145042600	Enhancers	K562	blood
11	chr1:145040400-145043000	Enhancers	Psoas Muscle	Psoas
12	chr1:145040600-145041200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:145040600-145041200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr1:145040600-145041200	Enhancers	Brain Hippocampus Middle	brain
15	chr1:145040600-145041200	Enhancers	HMEC	breast
16	chr1:145040600-145041400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr1:145040600-145041400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr1:145040600-145041400	Enhancers	Colon Smooth Muscle	Colon
19	chr1:145040600-145041400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
20	chr1:145040600-145042200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr1:145040600-145042200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr1:145040600-145042200	Enhancers	HSMM	muscle
23	chr1:145040600-145042400	Weak transcription	NH-A	brain
24	chr1:145040600-145042800	Weak transcription	Placenta Amnion	Placenta Amnion
25	chr1:145040600-145043000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr1:145040800-145041200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
27	chr1:145040800-145041400	Enhancers	Brain Angular Gyrus	brain
28	chr1:145040800-145041400	Enhancers	Brain Cingulate Gyrus	brain
29	chr1:145040800-145041600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr1:145040800-145042000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr1:145040800-145042200	Weak transcription	Muscle Satellite Cultured Cells	--
32	chr1:145040800-145042200	Weak transcription	NHDF-Ad	bronchial
33	chr1:145040800-145042200	Weak transcription	Osteobl	bone
34	chr1:145040800-145042400	Weak transcription	Pancreatic Islets	Pancreatic Islet
35	chr1:145040800-145042800	Weak transcription	Brain Anterior Caudate	brain
36	chr1:145040800-145043000	Weak transcription	Adipose Nuclei	Adipose
37	chr1:145040800-145043600	Enhancers	HSMMtube	muscle
38	chr1:145041000-145041200	Bivalent/Poised TSS	Primary T cells from cord blood	blood
39	chr1:145041000-145041200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr1:145041000-145041600	Enhancers	Fetal Heart	heart
41	chr1:145041000-145042400	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr1:145041000-145043000	Weak transcription	Brain Substantia Nigra	brain

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