Variant report

Variant	rs1778660
Chromosome Location	chr1:145042746-145042747
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr1:145042470-145043521	MCF10A-Er-Src	breast:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
2	BACH1	chr1:145040155-145043641	K562	blood:	n/a	n/a
3	JUND	chr1:145042627-145043370	HCT-116	colon:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
4	STAT3	chr1:145041882-145043573	MCF10A-Er-Src	breast:	n/a	chr1:145042852-145042863
5	JUN	chr1:145042186-145043571	K562	blood:	n/a	chr1:145042901-145042909
6	ZC3H11A	chr1:145038377-145043739	K562	blood:	n/a	n/a
7	NFE2	chr1:145042527-145043629	GM12878	blood:	n/a	n/a
8	MYC	chr1:145042674-145043367	MCF10A-Er-Src	breast:	n/a	n/a
9	STAT3	chr1:145041772-145043642	MCF10A-Er-Src	breast:	n/a	chr1:145042852-145042863
10	JUND	chr1:145042730-145043236	HepG2	liver:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
11	MXI1	chr1:145038150-145043822	SK-N-SH	brain:	n/a	n/a
12	POLR2A	chr1:145042681-145043748	U87	brain:	n/a	n/a
13	STAT5A	chr1:145042070-145043441	K562	blood:	n/a	n/a
14	ATF1	chr1:145042745-145043636	K562	blood:	n/a	n/a
15	MXI1	chr1:145041128-145043672	K562	blood:	n/a	n/a
16	JUND	chr1:145042183-145043405	K562	blood:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
17	POLR2A	chr1:145042574-145043724	U87	brain:	n/a	n/a
18	STAT3	chr1:145041644-145043636	MCF10A-Er-Src	breast:	n/a	chr1:145042852-145042863
19	SETDB1	chr1:145042698-145043295	U2OS	brain:	n/a	n/a
20	UBTF	chr1:145042066-145043509	K562	blood:	n/a	n/a
21	CEBPB	chr1:145042717-145043304	IMR90	lung:	n/a	n/a
22	FOS	chr1:145042602-145043656	MCF10A-Er-Src	breast:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
23	ARID3A	chr1:145040639-145043538	K562	blood:	n/a	n/a
24	CEBPB	chr1:145042053-145043148	K562	blood:	n/a	n/a
25	JUN	chr1:145042730-145043568	K562	blood:	n/a	chr1:145042901-145042909
26	MYC	chr1:145041488-145043519	MCF10A-Er-Src	breast:	n/a	n/a
27	JUN	chr1:145042728-145043254	HUVEC	blood vessel:	n/a	chr1:145042901-145042909
28	FOSL1	chr1:145042719-145043291	HCT-116	colon:	n/a	chr1:145042901-145042909
29	EP300	chr1:145041290-145043710	K562	blood:	n/a	chr1:145042843-145042857 chr1:145043684-145043698
30	MAFK	chr1:145042087-145043674	K562	blood:	n/a	chr1:145042899-145042908
31	E2F4	chr1:145041651-145043534	MCF10A-Er-Src	breast:	n/a	n/a
32	JUN	chr1:145038127-145043841	K562	blood:	n/a	chr1:145038750-145038761 chr1:145042901-145042909
33	JUN	chr1:145042733-145043497	K562	blood:	n/a	chr1:145042901-145042909
34	EP300	chr1:145041881-145043309	K562	blood:	n/a	chr1:145042843-145042857
35	STAT3	chr1:145042716-145043141	Hela-S3	cervix:	n/a	chr1:145042852-145042863
36	CBX3	chr1:145042721-145043467	HCT-116	colon:	n/a	n/a
37	EP300	chr1:145042708-145043193	Hela-S3	cervix:	n/a	chr1:145042843-145042857
38	TBL1XR1	chr1:145040297-145043605	K562	blood:	n/a	n/a
39	FOSL2	chr1:145042295-145043158	SK-N-SH	brain:	n/a	chr1:145042901-145042909
40	KAP1	chr1:145041155-145043800	K562	blood:	n/a	n/a
41	CEBPB	chr1:145042746-145043112	Hela-S3	cervix:	n/a	n/a
42	CUX1	chr1:145042143-145043724	K562	blood:	n/a	n/a
43	POLR2A	chr1:145042525-145043730	U87	brain:	n/a	n/a
44	FOS	chr1:145041553-145043531	HUVEC	blood vessel:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
45	CBX3	chr1:145042074-145043712	K562	blood:	n/a	n/a
46	FOSL2	chr1:145042539-145043669	SK-N-SH	brain:	n/a	chr1:145042901-145042909
47	RFX5	chr1:145040460-145043550	K562	blood:	n/a	n/a
48	FOS	chr1:145041400-145043550	MCF10A-Er-Src	breast:	n/a	chr1:145042911-145042922 chr1:145042901-145042909
49	FOSL2	chr1:145042617-145043185	A549	lung:	n/a	chr1:145042901-145042909
50	NFYA	chr1:145041339-145043069	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:145041147..145043858-chr1:145090158..145092282,3	K562	blood:
2	chr1:144938052..144939993-chr1:145041831..145044190,2	K562	blood:
3	chr1:145041571..145043626-chr1:145061448..145065159,3	K562	blood:
4	chr1:145041561..145043380-chr1:145095219..145097292,2	K562	blood:

Variant related genes	Relation type
RN7SKP88	TF binding region
PDE4DIP	TF binding region
ENSG00000223380	Chromatin interaction

Extended variants
information (count: 145 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10910730	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs12024305	0.84[CHB][hapmap]
rs1539655	1.00[YRI][hapmap]
rs1539656	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1616118	1.00[CHB][hapmap]
rs1621108	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1625512	1.00[CHB][hapmap];1.00[YRI][hapmap]
rs1627675	1.00[CHB][hapmap];1.00[YRI][hapmap]
rs1630994	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1663855	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1663862	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1663873	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1664024	1.00[JPT][hapmap]
rs1664028	1.00[CHB][hapmap]
rs1747959	0.88[CHB][hapmap]
rs1778121	1.00[YRI][hapmap]
rs1778601	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs1778603	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1778613	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1778698	1.00[JPT][hapmap]
rs1778699	1.00[JPT][hapmap]
rs1778746	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1778748	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1778759	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1778761	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1778763	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1778772	0.88[CHB][hapmap]
rs2489083	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2590078	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2590125	0.82[YRI][hapmap]
rs2653711	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs2762723	0.86[CHB][hapmap];1.00[YRI][hapmap]
rs2762736	1.00[YRI][hapmap]
rs2762863	1.00[YRI][hapmap]
rs2762879	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs2798894	1.00[YRI][hapmap]
rs2798895	0.82[CHB][hapmap];1.00[YRI][hapmap]
rs2798904	0.88[CHB][hapmap];1.00[YRI][hapmap]
rs719603	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1828275	chr1:144274482-145098718	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
2	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
3	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
4	nsv872212	chr1:144850451-145073750	Strong transcription Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
5	nsv1005230	chr1:144865627-145151820	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
6	esv1828244	chr1:144865627-145243316	Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
7	esv2753260	chr1:144873327-145129144	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
8	nsv872214	chr1:144875799-145195645	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
9	nsv821620	chr1:144885908-145095806	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
10	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
11	esv1824264	chr1:144902232-145098718	Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
12	esv1828303	chr1:144902232-145098718	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
13	esv1831542	chr1:144902232-145098718	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
14	esv1843292	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
15	esv1850612	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
16	esv1819879	chr1:144902232-145287810	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
17	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
18	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
19	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
20	nsv870419	chr1:144912330-145113174	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
21	nsv1013214	chr1:144914802-145069306	Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
22	nsv821349	chr1:144916753-145090362	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
23	nsv824365	chr1:144916753-145090362	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	esv1818887	chr1:144919989-145074925	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
25	esv32934	chr1:144920018-145079815	Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
26	esv3387252	chr1:144922395-145093993	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
27	esv1814765	chr1:144923014-145074925	ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
28	esv1820235	chr1:144923014-145087821	Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
29	esv1805522	chr1:144938320-145104261	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
30	esv1846928	chr1:144938320-145104261	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
31	esv1815206	chr1:144940095-145082961	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
32	esv1815389	chr1:144940855-145080948	Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
33	esv1846259	chr1:144941990-145083949	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
34	esv1830107	chr1:144942423-145074925	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
35	esv1850767	chr1:144942423-145074925	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
36	esv1826390	chr1:144943140-145085418	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
37	esv1815951	chr1:144948280-145078168	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
38	esv1845217	chr1:144948280-145078168	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
39	esv1826769	chr1:144948280-145088893	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
40	esv19656	chr1:144948283-145083994	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
41	nsv8069	chr1:144948383-145081051	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
42	nsv1007674	chr1:144948956-145069306	Weak transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
43	nsv824376	chr1:144949067-145080191	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
44	esv1818816	chr1:144949949-145075125	Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
45	esv1819156	chr1:144949949-145075125	Genic enhancers Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
46	esv1829419	chr1:144949949-145075125	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
47	esv1831919	chr1:144949949-145075125	Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
48	esv1848630	chr1:144949949-145075125	Enhancers Flanking Active TSS Genic enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
49	esv1850050	chr1:144949949-145075125	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
50	nsv998368	chr1:144949963-145060282	Active TSS Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145040400-145043000	Enhancers	Psoas Muscle	Psoas
2	chr1:145040600-145042800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr1:145040600-145043000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:145040800-145042800	Weak transcription	Brain Anterior Caudate	brain
5	chr1:145040800-145043000	Weak transcription	Adipose Nuclei	Adipose
6	chr1:145040800-145043600	Enhancers	HSMMtube	muscle
7	chr1:145041000-145043000	Weak transcription	Brain Substantia Nigra	brain
8	chr1:145041200-145043000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr1:145041200-145043400	Enhancers	Brain Germinal Matrix	brain
10	chr1:145041200-145054200	Weak transcription	Brain Hippocampus Middle	brain
11	chr1:145041400-145042800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:145041400-145042800	Weak transcription	Brain Cingulate Gyrus	brain
13	chr1:145041400-145042800	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr1:145041400-145043000	Weak transcription	Brain Angular Gyrus	brain
15	chr1:145041400-145043000	Weak transcription	Colon Smooth Muscle	Colon
16	chr1:145041400-145045000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr1:145041600-145043000	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr1:145042000-145046200	Weak transcription	Fetal Brain Female	brain
19	chr1:145042200-145042800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr1:145042200-145042800	Enhancers	NHDF-Ad	bronchial
21	chr1:145042200-145043000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr1:145042200-145043000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr1:145042200-145043000	Enhancers	NHLF	lung
24	chr1:145042200-145043000	Enhancers	Osteobl	bone
25	chr1:145042200-145043400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr1:145042200-145043600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr1:145042200-145043600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr1:145042200-145043600	Enhancers	HMEC	breast
29	chr1:145042200-145043600	Enhancers	NHEK	skin
30	chr1:145042400-145042800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr1:145042400-145042800	Enhancers	NH-A	brain
32	chr1:145042400-145043000	Enhancers	Aorta	Aorta
33	chr1:145042400-145043000	Bivalent Enhancer	Esophagus	oesophagus
34	chr1:145042400-145043000	Enhancers	Pancreatic Islets	Pancreatic Islet
35	chr1:145042400-145043000	Bivalent Enhancer	Left Ventricle	heart
36	chr1:145042400-145043000	Enhancers	HSMM	muscle
37	chr1:145042400-145043200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr1:145042400-145043400	Enhancers	Brain Inferior Temporal Lobe	brain
39	chr1:145042400-145043400	Bivalent Enhancer	Fetal Muscle Leg	muscle
40	chr1:145042400-145043400	Enhancers	Placenta	Placenta
41	chr1:145042400-145043400	Enhancers	Right Ventricle	heart
42	chr1:145042400-145043400	Enhancers	HUVEC	blood vessel
43	chr1:145042400-145043600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr1:145042600-145042800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr1:145042600-145042800	Weak transcription	K562	blood
46	chr1:145042600-145043000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr1:145042600-145043000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr1:145042600-145043200	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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