Variant report

Variant rs1778748
Chromosome Location chr1:145054088-145054089
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145041200-145054200 Weak transcription Brain Hippocampus Middle brain
2 chr1:145043400-145054800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr1:145043600-145055000 Weak transcription Brain Angular Gyrus brain
4 chr1:145047600-145065800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:145048200-145057600 Weak transcription Aorta Aorta
6 chr1:145048800-145057600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:145053000-145055000 Weak transcription Fetal Brain Male brain
8 chr1:145054000-145054200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:145054000-145054200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:145054000-145054200 Flanking Active TSS Colon Smooth Muscle Colon
11 chr1:145054000-145054200 Enhancers Fetal Lung lung
12 chr1:145054000-145054200 Enhancers Pancreas Pancrea
13 chr1:145054000-145054200 Enhancers Right Ventricle heart
14 chr1:145054000-145054200 Weak transcription K562 blood
15 chr1:145054000-145054400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:145054000-145054400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:145054000-145054400 Flanking Active TSS Stomach Smooth Muscle stomach
18 chr1:145054000-145054400 Enhancers HSMM muscle
19 chr1:145054000-145054800 Enhancers Skeletal Muscle Female skeletal muscle
20 chr1:145054000-145054800 Enhancers NHDF-Ad bronchial
21 chr1:145054000-145055400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:145054000-145055400 Enhancers Cortex derived primary cultured neurospheres brain
23 chr1:145054000-145055400 Enhancers Psoas Muscle Psoas
24 chr1:145054000-145055600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:145054000-145055600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:145054000-145055600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:145054000-145055600 Enhancers Duodenum Smooth Muscle Duodenum
28 chr1:145054000-145055600 Enhancers Fetal Kidney kidney
29 chr1:145054000-145055600 Enhancers Fetal Stomach stomach
30 chr1:145054000-145055600 Enhancers NHLF lung
31 chr1:145054000-145055800 Enhancers Muscle Satellite Cultured Cells --
32 chr1:145054000-145055800 Enhancers Adipose Nuclei Adipose
33 chr1:145054000-145055800 Enhancers Skeletal Muscle Male skeletal muscle
34 chr1:145054000-145056000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:145054000-145056000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:145054000-145056000 Enhancers Rectal Smooth Muscle rectum
37 chr1:145054000-145056000 Enhancers Osteobl bone
38 chr1:145054000-145056200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:145054000-145056400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:145054000-145056400 Enhancers Fetal Muscle Leg muscle
41 chr1:145054000-145057200 Enhancers Brain Germinal Matrix brain

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