Variant report

Variant	rs12024305
Chromosome Location	chr1:145017906-145017907
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr1:145017887-145019078	K562	blood:	n/a	n/a
2	SMARCB1	chr1:145012553-145018909	K562	blood:	n/a	n/a
3	HCFC1	chr1:145012078-145018983	K562	blood:	n/a	n/a
4	IRF1	chr1:145012069-145018864	K562	blood:	n/a	chr1:145012723-145012744 chr1:145013079-145013088 chr1:145014529-145014543 chr1:145012766-145012787 chr1:145018062-145018078
5	CUX1	chr1:145012016-145018904	K562	blood:	n/a	chr1:145014835-145014846
6	POLR2A	chr1:145017005-145018223	SK-N-MC	brain:	n/a	n/a
7	TBL1XR1	chr1:145012066-145018931	K562	blood:	n/a	n/a
8	POLR2A	chr1:145016921-145018489	SK-N-MC	brain:	n/a	n/a
9	MAZ	chr1:145013053-145018745	K562	blood:	n/a	chr1:145018225-145018234 chr1:145014498-145014507
10	ZNF384	chr1:145012212-145018726	K562	blood:	n/a	n/a
11	JUN	chr1:145017188-145018734	K562	blood:	n/a	chr1:145017516-145017525
12	GATA1	chr1:145011827-145020197	K562	blood:	n/a	chr1:145020038-145020059 chr1:145014921-145014928 chr1:145020045-145020052 chr1:145020040-145020056 chr1:145017515-145017525 chr1:145012877-145012898 chr1:145020045-145020052 chr1:145018152-145018163 chr1:145014514-145014535 chr1:145020045-145020052 chr1:145019398-145019405 chr1:145012781-145012792
13	JUND	chr1:145012231-145018901	K562	blood:	n/a	chr1:145017516-145017525
14	EP300	chr1:145016357-145018937	K562	blood:	n/a	chr1:145018099-145018113 chr1:145017723-145017737 chr1:145018005-145018019 chr1:145017426-145017436 chr1:145018772-145018786
15	JUN	chr1:145011915-145019187	K562	blood:	n/a	chr1:145017516-145017525
16	MAFK	chr1:145012040-145018830	K562	blood:	n/a	chr1:145014477-145014492 chr1:145015132-145015148 chr1:145018371-145018386 chr1:145015130-145015150 chr1:145015133-145015147 chr1:145012931-145012946
17	MYC	chr1:145012069-145018933	K562	blood:	n/a	chr1:145018225-145018234 chr1:145014498-145014507
18	GATA3	chr1:145017865-145018665	SK-N-SH	brain:	n/a	chr1:145018152-145018163
19	ARID3A	chr1:145012025-145018939	K562	blood:	n/a	chr1:145012568-145012584 chr1:145012567-145012583
20	UBTF	chr1:145016886-145018919	K562	blood:	n/a	n/a
21	NFYA	chr1:145017218-145018599	K562	blood:	n/a	chr1:145017307-145017321 chr1:145017307-145017322 chr1:145017307-145017322 chr1:145017306-145017318
22	GTF2F1	chr1:145017857-145018055	H1-hESC	embryonic stem cell:	n/a	n/a
23	TCF7L2	chr1:145017459-145018867	HepG2	liver:	n/a	chr1:145018447-145018461
24	RCOR1	chr1:145012046-145018776	K562	blood:	n/a	n/a
25	TEAD4	chr1:145017839-145018807	K562	blood:	n/a	n/a
26	UBTF	chr1:145012707-145018404	K562	blood:	n/a	n/a
27	ZMIZ1	chr1:145012998-145018896	K562	blood:	n/a	n/a
28	STAT3	chr1:145017625-145018524	MCF10A-Er-Src	breast:	n/a	n/a
29	RFX5	chr1:145016742-145019065	K562	blood:	n/a	n/a
30	IRF1	chr1:145012271-145018976	K562	blood:	n/a	chr1:145012723-145012744 chr1:145013079-145013088 chr1:145014529-145014543 chr1:145012766-145012787 chr1:145018062-145018078

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:145016170..145017911-chr6:115806977..115809975,2	MCF-7	breast:
2	chr1:144930056..144932339-chr1:145016108..145018468,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-POLR3GL-6	chr1:145017881-145017999	NONHSAT005872

Variant related genes	Relation type
PDE4DIP	TF binding region
ENSG00000272755	TF binding region
ENSG00000178104	Chromatin interaction

Extended variants
information (count: 131 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10910730	0.82[CHB][hapmap]
rs12032486	1.00[CHB][hapmap]
rs1539656	0.82[CHB][hapmap]
rs1616118	1.00[CHB][hapmap]
rs1621108	1.00[CHB][hapmap]
rs1625212	0.86[CHB][hapmap]
rs1625255	0.86[CHB][hapmap]
rs1625512	1.00[CHB][hapmap]
rs1627675	0.82[CHB][hapmap]
rs1630994	1.00[CHB][hapmap]
rs1663855	0.82[CHB][hapmap]
rs1664024	1.00[CHB][hapmap]
rs1664028	1.00[CHB][hapmap]
rs1778601	1.00[CHB][hapmap]
rs1778603	1.00[CHB][hapmap]
rs1778613	1.00[CHB][hapmap]
rs1778660	0.84[CHB][hapmap]
rs1778746	0.84[CHB][hapmap]
rs1778748	0.84[CHB][hapmap]
rs1778759	0.82[CHB][hapmap]
rs1778761	0.82[CHB][hapmap]
rs1778763	0.84[CHB][hapmap]
rs2489083	0.84[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:108 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1828275	chr1:144274482-145098718	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	304 gene(s)	inside rSNPs	diseases
2	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
3	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
4	nsv872212	chr1:144850451-145073750	Strong transcription Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
5	nsv872213	chr1:144865454-145033984	Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
6	nsv1005230	chr1:144865627-145151820	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
7	esv1828244	chr1:144865627-145243316	Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
8	esv2753760	chr1:144873327-145041016	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
9	esv2753260	chr1:144873327-145129144	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
10	nsv872214	chr1:144875799-145195645	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
11	nsv821620	chr1:144885908-145095806	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
12	esv2753261	chr1:144889465-145041016	Genic enhancers Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
13	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
14	nsv872216	chr1:144894697-145041251	Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
15	esv1824264	chr1:144902232-145098718	Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
16	esv1828303	chr1:144902232-145098718	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
17	esv1831542	chr1:144902232-145098718	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
18	esv1843292	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
19	esv1850612	chr1:144902232-145098718	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
20	esv1819879	chr1:144902232-145287810	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
21	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
22	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
23	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
24	nsv870419	chr1:144912330-145113174	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
25	nsv1014405	chr1:144914802-145041053	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
26	nsv1013214	chr1:144914802-145069306	Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
27	nsv821349	chr1:144916753-145090362	Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
28	nsv824365	chr1:144916753-145090362	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
29	esv1818887	chr1:144919989-145074925	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
30	esv32934	chr1:144920018-145079815	Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
31	esv3387252	chr1:144922395-145093993	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
32	esv1814765	chr1:144923014-145074925	ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
33	esv1820235	chr1:144923014-145087821	Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
34	esv1805522	chr1:144938320-145104261	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
35	esv1846928	chr1:144938320-145104261	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
36	esv1815206	chr1:144940095-145082961	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
37	esv1815389	chr1:144940855-145080948	Bivalent Enhancer Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
38	esv1846259	chr1:144941990-145083949	Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
39	esv1830107	chr1:144942423-145074925	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
40	esv1850767	chr1:144942423-145074925	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
41	esv1826390	chr1:144943140-145085418	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
42	esv1815951	chr1:144948280-145078168	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
43	esv1845217	chr1:144948280-145078168	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
44	esv1826769	chr1:144948280-145088893	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
45	esv19656	chr1:144948283-145083994	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
46	nsv8069	chr1:144948383-145081051	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
47	nsv1005180	chr1:144948956-145041053	Bivalent Enhancer Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
48	nsv1007674	chr1:144948956-145069306	Weak transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
49	nsv824376	chr1:144949067-145080191	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
50	esv1818816	chr1:144949949-145075125	Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145000800-145021600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr1:145002800-145024200	Weak transcription	Gastric	stomach
3	chr1:145010600-145023600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:145014000-145018000	Enhancers	Psoas Muscle	Psoas
5	chr1:145015200-145018000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr1:145015200-145021200	Strong transcription	Placenta	Placenta
7	chr1:145015400-145018600	Genic enhancers	Brain Angular Gyrus	brain
8	chr1:145015400-145019800	Weak transcription	Fetal Intestine Small	intestine
9	chr1:145015400-145030000	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr1:145015800-145018000	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr1:145015800-145019600	Weak transcription	Fetal Heart	heart
12	chr1:145015800-145023000	Weak transcription	Fetal Stomach	stomach
13	chr1:145015800-145023400	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr1:145016200-145018200	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr1:145016200-145018400	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr1:145016400-145018000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr1:145016400-145018200	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr1:145016400-145018200	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr1:145016400-145020600	Weak transcription	Colon Smooth Muscle	Colon
20	chr1:145016400-145021200	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr1:145016600-145018200	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr1:145016600-145019600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr1:145016600-145019800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr1:145016600-145020200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr1:145016600-145020200	Strong transcription	NHDF-Ad	bronchial
26	chr1:145016600-145021400	Strong transcription	Osteobl	bone
27	chr1:145016600-145022000	Weak transcription	Right Ventricle	heart
28	chr1:145016600-145022200	Strong transcription	HSMM	muscle
29	chr1:145016600-145023600	Weak transcription	Pancreas	Pancrea
30	chr1:145016800-145018200	Weak transcription	Lung	lung
31	chr1:145016800-145018400	Genic enhancers	HSMMtube	muscle
32	chr1:145016800-145021400	Weak transcription	Left Ventricle	heart
33	chr1:145016800-145022200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr1:145016800-145024000	Weak transcription	NH-A	brain
35	chr1:145016800-145032600	Weak transcription	Liver	Liver
36	chr1:145016800-145032800	Weak transcription	Spleen	Spleen
37	chr1:145017000-145018000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
38	chr1:145017000-145018200	Enhancers	ES-I3 Cell Line	embryonic stem cell
39	chr1:145017000-145018400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr1:145017000-145023200	Strong transcription	Muscle Satellite Cultured Cells	--
41	chr1:145017200-145018200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr1:145017200-145018200	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr1:145017200-145018400	Enhancers	Adipose Nuclei	Adipose
44	chr1:145017200-145018800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr1:145017400-145018000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr1:145017400-145018000	Weak transcription	Brain Hippocampus Middle	brain
47	chr1:145017400-145018600	Enhancers	Brain Anterior Caudate	brain
48	chr1:145017400-145018800	Enhancers	Brain Substantia Nigra	brain
49	chr1:145017400-145020000	Enhancers	Fetal Brain Female	brain
50	chr1:145017400-145020800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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