The 2.0 version of rSNPBase

Variant report

Variant rs17793120
Chromosome Location chr11:17896778-17896779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17838400-17971600 Weak transcription Gastric stomach
2 chr11:17863800-17939200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr11:17864400-17944800 Weak transcription Ovary ovary
4 chr11:17864800-17899400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr11:17868600-17914000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr11:17869000-17909600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr11:17869000-17916400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr11:17872600-17926600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr11:17876400-17900200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr11:17876800-17914000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr11:17878200-17898600 Weak transcription GM12878-XiMat blood
12 chr11:17882800-17943800 Weak transcription Rectal Smooth Muscle rectum
13 chr11:17884400-17919800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr11:17885800-17939200 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr11:17886000-17965200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr11:17888000-17897000 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr11:17888000-17897200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr11:17888000-17897200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr11:17888200-17915600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr11:17888200-17916200 Weak transcription HSMMtube muscle
21 chr11:17889000-17898200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr11:17889400-17897000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr11:17889600-17898400 Weak transcription Fetal Stomach stomach
24 chr11:17890600-17898000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr11:17891400-17907400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr11:17891800-17897200 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr11:17892000-17900600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr11:17893000-17901000 Strong transcription Primary T cells from cord blood blood
29 chr11:17893200-17897600 Strong transcription Primary B cells from cord blood blood
30 chr11:17893800-17897000 Weak transcription NHEK skin
31 chr11:17894200-17897400 Strong transcription HepG2 liver
32 chr11:17894400-17897400 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr11:17894600-17896800 Strong transcription Stomach Smooth Muscle stomach
34 chr11:17894600-17897000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr11:17894600-17897400 Enhancers Adipose Nuclei Adipose
36 chr11:17894600-17899600 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr11:17894600-17903000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr11:17894800-17896800 Enhancers HUVEC blood vessel
39 chr11:17894800-17898000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr11:17894800-17898800 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr11:17895200-17897000 Strong transcription Primary B cells from peripheral blood blood
42 chr11:17895200-17897800 Enhancers Left Ventricle heart
43 chr11:17895200-17939000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr11:17895400-17896800 Strong transcription Primary T cells fromperipheralblood blood
45 chr11:17895400-17899400 Strong transcription Aorta Aorta
46 chr11:17895400-17901800 Enhancers Fetal Thymus thymus
47 chr11:17895400-17901800 Enhancers Thymus Thymus
48 chr11:17895800-17897000 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr11:17895800-17897000 Enhancers Skeletal Muscle Male skeletal muscle
50 chr11:17895800-17897200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015