The 2.0 version of rSNPBase

Variant report

Variant rs72873826
Chromosome Location chr11:17889084-17889085
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17838400-17971600 Weak transcription Gastric stomach
2 chr11:17851600-17890800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr11:17858800-17893200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr11:17862200-17895400 Weak transcription Duodenum Mucosa Duodenum
5 chr11:17863800-17939200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr11:17864400-17894600 Weak transcription Stomach Smooth Muscle stomach
7 chr11:17864400-17944800 Weak transcription Ovary ovary
8 chr11:17864800-17899400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr11:17866000-17894600 Weak transcription Adipose Nuclei Adipose
10 chr11:17866200-17894600 Weak transcription Liver Liver
11 chr11:17866600-17895400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr11:17867800-17890200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr11:17868400-17895200 Weak transcription Primary B cells from peripheral blood blood
14 chr11:17868600-17894800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr11:17868600-17914000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr11:17868800-17894600 Weak transcription Brain Anterior Caudate brain
17 chr11:17868800-17894800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr11:17868800-17895200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:17869000-17895400 Weak transcription Lung lung
20 chr11:17869000-17909600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr11:17869000-17916400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr11:17872600-17926600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr11:17873000-17895200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:17876400-17900200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr11:17876600-17895200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr11:17876800-17914000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr11:17877800-17896400 Weak transcription HSMM muscle
28 chr11:17878000-17895400 Weak transcription Primary T cells fromperipheralblood blood
29 chr11:17878200-17898600 Weak transcription GM12878-XiMat blood
30 chr11:17879000-17894800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr11:17880600-17889800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr11:17881800-17890000 Weak transcription Primary hematopoietic stem cells blood
33 chr11:17881800-17895200 Weak transcription Brain Angular Gyrus brain
34 chr11:17882000-17894600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr11:17882600-17894600 Weak transcription Pancreas Pancrea
36 chr11:17882800-17943800 Weak transcription Rectal Smooth Muscle rectum
37 chr11:17883200-17896600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:17883400-17889400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr11:17884400-17889400 Weak transcription Fetal Intestine Small intestine
40 chr11:17884400-17890400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:17884400-17894200 Weak transcription HepG2 liver
42 chr11:17884400-17919800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr11:17884600-17889800 Weak transcription H1 Cell Line embryonic stem cell
44 chr11:17885600-17893000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr11:17885800-17939200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr11:17886000-17965200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr11:17886400-17890400 Weak transcription Primary B cells from cord blood blood
48 chr11:17887600-17889600 Enhancers Fetal Thymus thymus
49 chr11:17887800-17895200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:17887800-17895200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015