The 2.0 version of rSNPBase

Variant report

Variant rs72873835
Chromosome Location chr11:17894859-17894860
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17838400-17971600 Weak transcription Gastric stomach
2 chr11:17862200-17895400 Weak transcription Duodenum Mucosa Duodenum
3 chr11:17863800-17939200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr11:17864400-17944800 Weak transcription Ovary ovary
5 chr11:17864800-17899400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr11:17866600-17895400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr11:17868400-17895200 Weak transcription Primary B cells from peripheral blood blood
8 chr11:17868600-17914000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr11:17868800-17895200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:17869000-17895400 Weak transcription Lung lung
11 chr11:17869000-17909600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr11:17869000-17916400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr11:17872600-17926600 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr11:17873000-17895200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:17876400-17900200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr11:17876600-17895200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr11:17876800-17914000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr11:17877800-17896400 Weak transcription HSMM muscle
19 chr11:17878000-17895400 Weak transcription Primary T cells fromperipheralblood blood
20 chr11:17878200-17898600 Weak transcription GM12878-XiMat blood
21 chr11:17881800-17895200 Weak transcription Brain Angular Gyrus brain
22 chr11:17882800-17943800 Weak transcription Rectal Smooth Muscle rectum
23 chr11:17883200-17896600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr11:17884400-17919800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr11:17885800-17939200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:17886000-17965200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr11:17887800-17895200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr11:17887800-17895200 Weak transcription Right Ventricle heart
29 chr11:17887800-17895400 Weak transcription Aorta Aorta
30 chr11:17887800-17895400 Weak transcription Spleen Spleen
31 chr11:17887800-17895600 Weak transcription Brain Cingulate Gyrus brain
32 chr11:17888000-17895000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:17888000-17897000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr11:17888000-17897200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr11:17888000-17897200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr11:17888200-17915600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr11:17888200-17916200 Weak transcription HSMMtube muscle
38 chr11:17889000-17898200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr11:17889400-17897000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr11:17889600-17898400 Weak transcription Fetal Stomach stomach
41 chr11:17889800-17895400 Weak transcription Fetal Brain Female brain
42 chr11:17890600-17898000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr11:17891200-17895200 Weak transcription Fetal Intestine Small intestine
44 chr11:17891200-17895400 Weak transcription Dnd41 blood
45 chr11:17891200-17896200 Weak transcription Psoas Muscle Psoas
46 chr11:17891400-17895200 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr11:17891400-17907400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr11:17891800-17897200 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr11:17892000-17900600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr11:17893000-17896200 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015