Variant report
| Variant | rs17819270 |
|---|---|
| Chromosome Location | chr15:56148719-56148720 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:56116600-56150600 | Weak transcription | Right Ventricle | heart |
| 2 | chr15:56116800-56162200 | Weak transcription | Fetal Heart | heart |
| 3 | chr15:56118600-56151000 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr15:56118800-56149200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 5 | chr15:56118800-56151400 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr15:56122600-56152000 | Weak transcription | Fetal Thymus | thymus |
| 7 | chr15:56122600-56153800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 8 | chr15:56122600-56154800 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 9 | chr15:56122600-56156600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 10 | chr15:56122800-56156000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 11 | chr15:56127200-56155400 | Strong transcription | Osteobl | bone |
| 12 | chr15:56127200-56155800 | Strong transcription | HSMM | muscle |
| 13 | chr15:56129000-56157400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 14 | chr15:56132000-56164800 | Weak transcription | Small Intestine | intestine |
| 15 | chr15:56133000-56152600 | Weak transcription | Brain Hippocampus Middle | brain |
| 16 | chr15:56133600-56154400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 17 | chr15:56134200-56150600 | Weak transcription | Left Ventricle | heart |
| 18 | chr15:56134400-56150000 | Weak transcription | Psoas Muscle | Psoas |
| 19 | chr15:56134400-56156600 | Weak transcription | Colon Smooth Muscle | Colon |
| 20 | chr15:56134800-56151800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 21 | chr15:56135000-56156600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 22 | chr15:56135200-56152600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr15:56138200-56161800 | Weak transcription | K562 | blood |
| 24 | chr15:56138400-56149000 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 25 | chr15:56138600-56154400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 26 | chr15:56138800-56152800 | Weak transcription | GM12878-XiMat | blood |
| 27 | chr15:56139400-56155400 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 28 | chr15:56139600-56153200 | Strong transcription | NHEK | skin |
| 29 | chr15:56140000-56148800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 30 | chr15:56140000-56149200 | Strong transcription | NH-A | brain |
| 31 | chr15:56140000-56152000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 32 | chr15:56140200-56149000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr15:56140200-56155600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 34 | chr15:56140600-56148800 | Strong transcription | A549 | lung |
| 35 | chr15:56141800-56150800 | Weak transcription | Dnd41 | blood |
| 36 | chr15:56142800-56153200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 37 | chr15:56142800-56155400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 38 | chr15:56143600-56149600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 39 | chr15:56144800-56150200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 40 | chr15:56145400-56149200 | Strong transcription | HMEC | breast |
| 41 | chr15:56145600-56149600 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr15:56145800-56148800 | Strong transcription | Fetal Muscle Leg | muscle |
| 43 | chr15:56145800-56153000 | Strong transcription | Fetal Intestine Small | intestine |
| 44 | chr15:56145800-56155400 | Strong transcription | Fetal Intestine Large | intestine |
| 45 | chr15:56146000-56149000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 46 | chr15:56146000-56153000 | Strong transcription | Fetal Stomach | stomach |
| 47 | chr15:56146200-56149200 | Strong transcription | Placenta | Placenta |
| 48 | chr15:56146200-56149200 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 49 | chr15:56146200-56149200 | Strong transcription | HSMMtube | muscle |
| 50 | chr15:56146200-56151800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
