The 2.0 version of rSNPBase

Variant report

Variant rs17826188
Chromosome Location chr14:78353368-78353369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:78297800-78353600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr14:78306000-78356400 Weak transcription Thymus Thymus
3 chr14:78322200-78353400 Weak transcription Duodenum Mucosa Duodenum
4 chr14:78324000-78353600 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr14:78324200-78354800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr14:78327800-78400600 Weak transcription Colonic Mucosa Colon
7 chr14:78328000-78353400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr14:78334600-78353400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr14:78335800-78358600 Weak transcription HSMMtube muscle
10 chr14:78336400-78354200 Weak transcription Fetal Intestine Large intestine
11 chr14:78339600-78353800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr14:78340000-78353400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr14:78340400-78353600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr14:78340600-78353400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr14:78340600-78353400 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr14:78340600-78353600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr14:78340600-78353600 Weak transcription Dnd41 blood
18 chr14:78340800-78354200 Weak transcription Primary B cells from cord blood blood
19 chr14:78342200-78353400 Weak transcription Aorta Aorta
20 chr14:78342200-78353400 Weak transcription Fetal Intestine Small intestine
21 chr14:78342800-78353600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr14:78345000-78353600 Weak transcription Liver Liver
23 chr14:78346600-78353400 Weak transcription Ovary ovary
24 chr14:78346600-78375600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr14:78346800-78353400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr14:78347200-78366000 Weak transcription Psoas Muscle Psoas
27 chr14:78347400-78353600 Weak transcription Pancreas Pancrea
28 chr14:78347800-78353400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr14:78348000-78356400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr14:78348800-78353400 Weak transcription Lung lung
31 chr14:78348800-78353600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr14:78349200-78355200 Weak transcription Rectal Smooth Muscle rectum
33 chr14:78349200-78355800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr14:78349200-78356000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr14:78349200-78356000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr14:78349200-78358200 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr14:78349200-78397200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr14:78349200-78407200 Weak transcription Colon Smooth Muscle Colon
39 chr14:78349400-78354400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr14:78349400-78355400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr14:78349400-78378000 Weak transcription Fetal Brain Female brain
42 chr14:78349800-78358400 Weak transcription Stomach Mucosa stomach
43 chr14:78350000-78355800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr14:78350200-78353400 Weak transcription Stomach Smooth Muscle stomach
45 chr14:78350200-78355600 Weak transcription Primary B cells from peripheral blood blood
46 chr14:78350200-78355800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr14:78350400-78354200 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr14:78350400-78354400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr14:78350400-78354400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr14:78350400-78361200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015