The 2.0 version of rSNPBase

Variant report

Variant rs10873312
Chromosome Location chr14:78289978-78289979
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:78267200-78304200 Weak transcription HSMMtube muscle
2 chr14:78267200-78310800 Weak transcription Esophagus oesophagus
3 chr14:78274800-78316600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr14:78283000-78293400 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr14:78283200-78301800 Weak transcription Small Intestine intestine
6 chr14:78283600-78311000 Weak transcription Hela-S3 cervix
7 chr14:78283800-78297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr14:78284000-78292200 Weak transcription Stomach Mucosa stomach
9 chr14:78284000-78299400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr14:78284200-78298000 Weak transcription HepG2 liver
11 chr14:78284200-78309400 Weak transcription Brain Germinal Matrix brain
12 chr14:78284200-78312600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr14:78284800-78291600 Weak transcription Fetal Heart heart
14 chr14:78284800-78300800 Weak transcription Fetal Brain Male brain
15 chr14:78284800-78305200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr14:78285200-78290200 Strong transcription Brain Inferior Temporal Lobe brain
17 chr14:78285200-78293200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr14:78285800-78305800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr14:78286200-78299000 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr14:78286200-78301800 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr14:78286200-78303000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr14:78286400-78293400 Weak transcription Muscle Satellite Cultured Cells --
23 chr14:78286400-78294000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr14:78286400-78299200 Weak transcription Rectal Smooth Muscle rectum
25 chr14:78286400-78300400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr14:78286400-78303000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr14:78286400-78305200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr14:78286600-78292200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr14:78287000-78290600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr14:78287000-78292200 Weak transcription Gastric stomach
31 chr14:78287000-78297400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr14:78287000-78301400 Weak transcription Right Ventricle heart
33 chr14:78287000-78309400 Weak transcription Primary B cells from peripheral blood blood
34 chr14:78287000-78309600 Weak transcription Osteobl bone
35 chr14:78288400-78290000 Strong transcription Thymus Thymus
36 chr14:78288400-78290400 Strong transcription Fetal Intestine Small intestine
37 chr14:78288600-78290200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr14:78288600-78290200 Strong transcription Colon Smooth Muscle Colon
39 chr14:78288600-78290400 Strong transcription Fetal Intestine Large intestine
40 chr14:78288600-78290800 Weak transcription Fetal Lung lung
41 chr14:78288600-78290800 Strong transcription Fetal Stomach stomach
42 chr14:78288600-78293000 Strong transcription Ovary ovary
43 chr14:78288600-78299400 Weak transcription GM12878-XiMat blood
44 chr14:78288800-78290400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr14:78288800-78290600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr14:78288800-78295200 Weak transcription Primary B cells from cord blood blood
47 chr14:78289200-78292200 Weak transcription Right Atrium heart
48 chr14:78289200-78296600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr14:78289200-78297000 Weak transcription Aorta Aorta
50 chr14:78289200-78301200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015