The 2.0 version of rSNPBase

Variant report

Variant rs2080818
Chromosome Location chr14:78327376-78327377
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:78293400-78331800 Weak transcription Pancreas Pancrea
2 chr14:78297600-78336600 Weak transcription Left Ventricle heart
3 chr14:78297800-78353600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr14:78301400-78342200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr14:78302200-78331000 Weak transcription Liver Liver
6 chr14:78306000-78328800 Weak transcription Primary T cells fromperipheralblood blood
7 chr14:78306000-78331800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr14:78306000-78356400 Weak transcription Thymus Thymus
9 chr14:78306600-78330400 Weak transcription Dnd41 blood
10 chr14:78310000-78339400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr14:78310400-78345000 Weak transcription Brain Cingulate Gyrus brain
12 chr14:78314200-78348400 Weak transcription Colon Smooth Muscle Colon
13 chr14:78320800-78342200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr14:78321400-78342800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr14:78321800-78335400 Weak transcription Psoas Muscle Psoas
16 chr14:78321800-78348400 Weak transcription Placenta Placenta
17 chr14:78322000-78342000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr14:78322000-78342600 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr14:78322200-78353400 Weak transcription Duodenum Mucosa Duodenum
20 chr14:78322800-78331600 Enhancers K562 blood
21 chr14:78323400-78339600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr14:78323600-78330600 Weak transcription Aorta Aorta
23 chr14:78323600-78331600 Weak transcription Primary B cells from cord blood blood
24 chr14:78324000-78328200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr14:78324000-78353600 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr14:78324200-78327600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr14:78324200-78328400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr14:78324200-78354800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr14:78324400-78328800 Weak transcription Right Ventricle heart
30 chr14:78324400-78339800 Weak transcription Ovary ovary
31 chr14:78324800-78330400 Weak transcription Stomach Mucosa stomach
32 chr14:78325000-78328200 Strong transcription Primary T cells from cord blood blood
33 chr14:78325000-78332400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr14:78325000-78345000 Weak transcription Brain Angular Gyrus brain
35 chr14:78325200-78327400 Strong transcription Fetal Stomach stomach
36 chr14:78325200-78329200 Strong transcription Fetal Intestine Small intestine
37 chr14:78325400-78328000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr14:78325800-78330800 Weak transcription Spleen Spleen
39 chr14:78326000-78328000 Strong transcription Stomach Smooth Muscle stomach
40 chr14:78326400-78327600 Weak transcription Brain Hippocampus Middle brain
41 chr14:78326400-78328000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr14:78326400-78339800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr14:78326400-78342000 Weak transcription Adipose Nuclei Adipose
44 chr14:78326600-78328000 Weak transcription Brain Substantia Nigra brain
45 chr14:78326600-78352800 Weak transcription Esophagus oesophagus
46 chr14:78326800-78328200 Weak transcription Fetal Heart heart
47 chr14:78327000-78328000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr14:78327000-78338000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr14:78327000-78339400 Weak transcription Fetal Muscle Leg muscle
50 chr14:78327000-78342000 Weak transcription Lung lung

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Last update: Aug 31, 2015