Variant report

Variant rs17879849
Chromosome Location chr11:67158698-67158699
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67156800-67158800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr11:67157800-67158800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:67158200-67158800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr11:67158200-67158800 Enhancers Primary hematopoietic stem cells blood
5 chr11:67158200-67158800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr11:67158200-67158800 Enhancers Spleen Spleen
7 chr11:67158200-67159000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr11:67158200-67159000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:67158200-67159200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
10 chr11:67158200-67159200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
11 chr11:67158200-67159200 Flanking Active TSS Dnd41 blood
12 chr11:67158200-67159200 Flanking Active TSS Hela-S3 cervix
13 chr11:67158200-67159400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr11:67158200-67160000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr11:67158200-67160000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
16 chr11:67158200-67160000 Active TSS A549 lung
17 chr11:67158200-67160200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr11:67158200-67160200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr11:67158200-67160400 Active TSS iPS-15b Cell Line embryonic stem cell
20 chr11:67158200-67160400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr11:67158200-67160400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
22 chr11:67158400-67158800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr11:67158400-67158800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
24 chr11:67158400-67158800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr11:67158400-67158800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
26 chr11:67158400-67158800 Flanking Active TSS Esophagus oesophagus
27 chr11:67158400-67158800 Flanking Active TSS Fetal Kidney kidney
28 chr11:67158400-67158800 Flanking Active TSS Fetal Lung lung
29 chr11:67158400-67158800 Flanking Active TSS Thymus Thymus
30 chr11:67158400-67158800 Flanking Active TSS HSMM muscle
31 chr11:67158400-67158800 Active TSS NH-A brain
32 chr11:67158400-67159000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:67158400-67159000 Flanking Active TSS Brain Anterior Caudate brain
34 chr11:67158400-67159000 Flanking Active TSS Brain Hippocampus Middle brain
35 chr11:67158400-67159000 Flanking Active TSS Duodenum Mucosa Duodenum
36 chr11:67158400-67159000 Flanking Active TSS Fetal Brain Female brain
37 chr11:67158400-67159000 Flanking Active TSS Fetal Stomach stomach
38 chr11:67158400-67159000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr11:67158400-67159000 Active TSS Right Atrium heart
40 chr11:67158400-67159200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
41 chr11:67158400-67159200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr11:67158400-67159200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr11:67158400-67159200 Flanking Active TSS Brain Germinal Matrix brain
44 chr11:67158400-67159200 Flanking Active TSS Colonic Mucosa Colon
45 chr11:67158400-67159200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
46 chr11:67158400-67159200 Flanking Active TSS Fetal Muscle Trunk muscle
47 chr11:67158400-67159200 Flanking Active TSS Fetal Muscle Leg muscle
48 chr11:67158400-67159200 Flanking Active TSS Placenta Placenta
49 chr11:67158400-67159200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
50 chr11:67158400-67159200 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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