Variant report

Variant rs1800812
Chromosome Location chr4:55094629-55094630
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:55091200-55099000 Bivalent/Poised TSS Fetal Kidney kidney
2 chr4:55091400-55095000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
3 chr4:55091400-55095200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
4 chr4:55091400-55096600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
5 chr4:55091600-55094800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
6 chr4:55091600-55095000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr4:55091800-55094800 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
8 chr4:55091800-55095400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
9 chr4:55092000-55094800 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
10 chr4:55092000-55094800 Flanking Bivalent TSS/Enh NHEK skin
11 chr4:55092000-55096800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
12 chr4:55092000-55100800 Active TSS Aorta Aorta
13 chr4:55092200-55094800 Flanking Active TSS NHLF lung
14 chr4:55092200-55096000 Flanking Active TSS NH-A brain
15 chr4:55092400-55097800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
16 chr4:55092400-55100600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr4:55092600-55094800 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
18 chr4:55092800-55094800 Bivalent Enhancer Stomach Mucosa stomach
19 chr4:55092800-55094800 Bivalent Enhancer Spleen Spleen
20 chr4:55093000-55094800 Flanking Bivalent TSS/Enh Brain Anterior Caudate brain
21 chr4:55093000-55095200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr4:55093200-55094800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
23 chr4:55093200-55095000 Bivalent Enhancer Primary B cells from peripheral blood blood
24 chr4:55093200-55100800 Active TSS NHDF-Ad bronchial
25 chr4:55093200-55102000 Active TSS Ovary ovary
26 chr4:55093400-55094800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr4:55093400-55094800 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
28 chr4:55093400-55094800 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
29 chr4:55093600-55094800 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
30 chr4:55093600-55094800 Flanking Active TSS HMEC breast
31 chr4:55093800-55096400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr4:55093800-55097000 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
33 chr4:55093800-55097800 Bivalent/Poised TSS Fetal Lung lung
34 chr4:55094200-55094800 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
35 chr4:55094200-55099000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
36 chr4:55094200-55100800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:55094400-55094800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr4:55094400-55094800 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr4:55094400-55094800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr4:55094400-55094800 Bivalent Enhancer Brain Angular Gyrus brain
41 chr4:55094400-55094800 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr4:55094400-55094800 Bivalent/Poised TSS Colonic Mucosa Colon
43 chr4:55094400-55094800 Bivalent Enhancer Left Ventricle heart
44 chr4:55094400-55094800 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
45 chr4:55094400-55095000 Bivalent Enhancer Primary hematopoietic stem cells blood
46 chr4:55094400-55095000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr4:55094400-55095000 Bivalent/Poised TSS Fetal Brain Female brain
48 chr4:55094400-55095000 Bivalent Enhancer HepG2 liver
49 chr4:55094400-55095000 Flanking Active TSS Osteobl bone
50 chr4:55094400-55095200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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