Variant report

Variant	rs1809208
Chromosome Location	chr3:79261037-79261038
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1563382	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17016815	1.00[ASN][1000 genomes]
rs1869801	1.00[ASN][1000 genomes]
rs324755	1.00[ASN][1000 genomes]
rs324756	1.00[ASN][1000 genomes]
rs4533610	1.00[ASN][1000 genomes]
rs9809987	1.00[ASN][1000 genomes]
rs9813399	1.00[ASN][1000 genomes]
rs9815951	1.00[ASN][1000 genomes]
rs9845808	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763281	chr3:79246361-79489765	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:79260400-79261600	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr3:79260800-79261600	Enhancers	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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