Variant report

Variant	rs1823422
Chromosome Location	chr7:96531920-96531921
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10953197	0.85[ASN][1000 genomes]
rs11762340	0.83[ASN][1000 genomes]
rs12154321	0.85[ASN][1000 genomes]
rs12537923	0.82[EUR][1000 genomes]
rs12540421	0.82[EUR][1000 genomes]
rs12540422	0.82[EUR][1000 genomes]
rs13241077	0.89[ASN][1000 genomes]
rs1375671	0.82[EUR][1000 genomes]
rs1375672	0.82[EUR][1000 genomes]
rs1403183	0.84[ASN][1000 genomes]
rs1522538	0.93[ASN][1000 genomes]
rs16869160	0.81[EUR][1000 genomes]
rs17167890	0.81[EUR][1000 genomes]
rs1823421	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1823423	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs193268	0.81[EUR][1000 genomes]
rs2394554	0.82[EUR][1000 genomes]
rs2686924	0.89[ASN][1000 genomes]
rs2948249	0.82[EUR][1000 genomes]
rs352664	0.82[EUR][1000 genomes]
rs352667	0.82[EUR][1000 genomes]
rs4727350	0.82[EUR][1000 genomes]
rs4727351	0.82[EUR][1000 genomes]
rs4729315	0.82[EUR][1000 genomes]
rs4729316	0.82[EUR][1000 genomes]
rs4729317	0.82[EUR][1000 genomes]
rs4729318	0.82[EUR][1000 genomes]
rs4729320	0.87[ASN][1000 genomes]
rs4729321	0.87[ASN][1000 genomes]
rs6465558	0.81[EUR][1000 genomes]
rs6465559	0.81[EUR][1000 genomes]
rs6465560	0.81[EUR][1000 genomes]
rs6465561	0.81[EUR][1000 genomes]
rs6465562	0.82[EUR][1000 genomes]
rs6465565	0.82[EUR][1000 genomes]
rs6950597	0.82[EUR][1000 genomes]
rs6955035	0.82[EUR][1000 genomes]
rs6955143	0.82[EUR][1000 genomes]
rs6955254	0.82[EUR][1000 genomes]
rs6955262	0.82[EUR][1000 genomes]
rs6956115	0.82[EUR][1000 genomes]
rs6959570	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6960604	0.82[EUR][1000 genomes]
rs6960757	0.82[EUR][1000 genomes]
rs6972627	0.81[EUR][1000 genomes]
rs7792791	0.82[EUR][1000 genomes]
rs7803481	0.81[EUR][1000 genomes]
rs7809288	0.82[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96531600-96533000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr7:96531600-96533200	Weak transcription	HMEC	breast
3	chr7:96531600-96533400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr7:96531800-96533000	Weak transcription	NHEK	skin
5	chr7:96531800-96533400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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