Variant report

Variant rs182350055
Chromosome Location chr9:518541-518542
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:506000-520000 Weak transcription Aorta Aorta
2 chr9:506000-520200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:506400-519600 Weak transcription Colon Smooth Muscle Colon
4 chr9:507000-532600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr9:508400-522400 Weak transcription Fetal Muscle Leg muscle
6 chr9:512400-522400 Weak transcription Right Ventricle heart
7 chr9:513400-520800 Weak transcription Fetal Lung lung
8 chr9:513400-521000 Weak transcription Brain Substantia Nigra brain
9 chr9:513400-522400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:513600-522800 Weak transcription Brain Cingulate Gyrus brain
11 chr9:514000-532200 Weak transcription Fetal Muscle Trunk muscle
12 chr9:514800-519400 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr9:516000-521400 Enhancers Primary T helper cells PMA-I stimulated --
14 chr9:516200-520800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr9:516600-518800 Enhancers Left Ventricle heart
16 chr9:516800-518800 Enhancers Pancreas Pancrea
17 chr9:517000-522400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:517400-520600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr9:517400-522200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr9:517600-518600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr9:517600-519000 Enhancers Fetal Intestine Small intestine
22 chr9:517600-519400 Enhancers Fetal Intestine Large intestine
23 chr9:517600-520800 Weak transcription Brain Hippocampus Middle brain
24 chr9:517800-520000 Enhancers Primary T cells from cord blood blood
25 chr9:518000-518600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr9:518000-518600 Enhancers Sigmoid Colon Sigmoid Colon
27 chr9:518000-518600 Flanking Active TSS NHEK skin
28 chr9:518000-518800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr9:518000-522000 Weak transcription Colonic Mucosa Colon
30 chr9:518000-522400 Weak transcription Lung lung
31 chr9:518200-518600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr9:518200-518600 Enhancers Fetal Kidney kidney
33 chr9:518200-518600 Enhancers Rectal Mucosa Donor 31 rectum
34 chr9:518200-518600 Flanking Active TSS Stomach Mucosa stomach
35 chr9:518200-518800 Enhancers Placenta Amnion Placenta Amnion
36 chr9:518200-518800 Enhancers HMEC breast
37 chr9:518200-519000 Enhancers Primary hematopoietic stem cells blood
38 chr9:518200-519000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr9:518200-519400 Enhancers Right Atrium heart
40 chr9:518200-522400 Enhancers Fetal Heart heart
41 chr9:518400-518600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr9:518400-518600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr9:518400-518800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
44 chr9:518400-518800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
45 chr9:518400-518800 Active TSS Duodenum Mucosa Duodenum
46 chr9:518400-518800 Genic enhancers A549 lung
47 chr9:518400-519000 Enhancers Small Intestine intestine
48 chr9:518400-519000 Enhancers HepG2 liver
49 chr9:518400-519200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr9:518400-519400 Weak transcription Primary T helper cells fromperipheralblood blood

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