Variant report

Variant	rs1835841
Chromosome Location	chr8:130404604-130404605
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130402395..130404697-chr8:130404709..130406237,2	K562	blood:
2	chr8:130403263..130407136-chr8:130409731..130411798,3	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1347052	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs1347053	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs1432360	0.81[EUR][1000 genomes]
rs1432361	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2579865	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2579870	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs2579871	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2579872	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2579879	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2630507	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs2630508	0.81[EUR][1000 genomes]
rs2630510	0.81[EUR][1000 genomes]
rs2630514	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2630518	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2630519	1.00[CEU][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2719189	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs2719203	0.84[EUR][1000 genomes]
rs2719206	0.89[CEU][hapmap];0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2719211	0.81[EUR][1000 genomes]
rs2719212	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2719214	0.81[EUR][1000 genomes]
rs2719218	0.81[EUR][1000 genomes]
rs7828064	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7845472	0.81[EUR][1000 genomes]
rs976912	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs985688	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429942	chr8:130397818-130460011	Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130394800-130411800	Strong transcription	K562	blood
2	chr8:130401800-130405600	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr8:130401800-130405800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr8:130402600-130406600	Weak transcription	Dnd41	blood

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