Variant report
Variant | rs2719203 |
---|---|
Chromosome Location | chr8:130413274-130413275 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10105579 | 0.83[EUR][1000 genomes] |
rs10808579 | 0.86[EUR][1000 genomes] |
rs10808580 | 0.86[EUR][1000 genomes] |
rs1118872 | 0.86[EUR][1000 genomes] |
rs11787238 | 0.86[EUR][1000 genomes] |
rs12545968 | 0.86[EUR][1000 genomes] |
rs13250815 | 0.86[EUR][1000 genomes] |
rs1347052 | 0.86[EUR][1000 genomes] |
rs1347053 | 0.86[EUR][1000 genomes] |
rs1432360 | 0.86[EUR][1000 genomes] |
rs1432361 | 0.86[EUR][1000 genomes] |
rs1583247 | 0.84[EUR][1000 genomes] |
rs1594596 | 0.86[EUR][1000 genomes] |
rs1835841 | 0.84[EUR][1000 genomes] |
rs2579865 | 0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2579870 | 0.86[EUR][1000 genomes] |
rs2579871 | 0.85[EUR][1000 genomes] |
rs2579872 | 0.86[EUR][1000 genomes] |
rs2579879 | 0.86[EUR][1000 genomes] |
rs2630507 | 0.86[EUR][1000 genomes] |
rs2630508 | 0.86[EUR][1000 genomes] |
rs2630510 | 0.85[EUR][1000 genomes] |
rs2630514 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2630518 | 0.83[EUR][1000 genomes] |
rs2630519 | 0.84[EUR][1000 genomes] |
rs2719189 | 0.86[EUR][1000 genomes] |
rs2719206 | 0.90[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs2719211 | 0.86[EUR][1000 genomes] |
rs2719212 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2719214 | 0.86[EUR][1000 genomes] |
rs2719218 | 0.86[EUR][1000 genomes] |
rs4733549 | 0.86[EUR][1000 genomes] |
rs7015941 | 0.86[EUR][1000 genomes] |
rs7828064 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7828127 | 0.86[EUR][1000 genomes] |
rs7845472 | 0.86[EUR][1000 genomes] |
rs9694939 | 0.84[EUR][1000 genomes] |
rs976912 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs985688 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv429942 | chr8:130397818-130460011 | Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:130410200-130434600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
2 | chr8:130412200-130414200 | Weak transcription | K562 | blood |
3 | chr8:130412200-130416800 | Weak transcription | Dnd41 | blood |