Variant report

Variant rs1862415
Chromosome Location chr5:167394921-167394922
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:167385800-167407400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr5:167387800-167400600 Weak transcription Right Atrium heart
3 chr5:167388000-167396800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:167388200-167395000 Weak transcription Left Ventricle heart
5 chr5:167388200-167407600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:167391600-167410200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr5:167392800-167396800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr5:167393000-167395200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:167393200-167395000 Enhancers Brain Germinal Matrix brain
10 chr5:167393400-167395200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:167393800-167395000 Enhancers Cortex derived primary cultured neurospheres brain
12 chr5:167393800-167395000 Enhancers Right Ventricle heart
13 chr5:167394000-167395000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:167394000-167395000 Enhancers HUES48 Cell Line embryonic stem cell
15 chr5:167394000-167395000 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr5:167394000-167395200 Enhancers Fetal Lung lung
17 chr5:167394000-167395400 Enhancers Adipose Nuclei Adipose
18 chr5:167394200-167395000 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr5:167394200-167395000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr5:167394200-167396200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr5:167394200-167396400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:167394200-167396400 Strong transcription NHEK skin
23 chr5:167394400-167395200 Enhancers Primary hematopoietic stem cells blood
24 chr5:167394400-167396000 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr5:167394600-167395000 Enhancers HUES64 Cell Line embryonic stem cell
26 chr5:167394600-167395200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:167394600-167395800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:167394800-167395000 Enhancers H1 Cell Line embryonic stem cell
29 chr5:167394800-167395000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr5:167394800-167395000 Enhancers NH-A brain
31 chr5:167394800-167395200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr5:167394800-167395200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:167394800-167395200 Enhancers HUES6 Cell Line embryonic stem cell
34 chr5:167394800-167395200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr5:167394800-167395200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr5:167394800-167395400 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr5:167394800-167395400 Enhancers HSMM muscle
38 chr5:167394800-167396000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:167394800-167396000 Enhancers HSMMtube muscle
40 chr5:167394800-167397200 Weak transcription Brain Anterior Caudate brain

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