The 2.0 version of rSNPBase

Variant report

Variant rs1867416
Chromosome Location chr15:41963640-41963641
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41954400-41964600 Weak transcription Lung lung
2 chr15:41954400-41970600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr15:41954400-41978600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:41954400-41982800 Weak transcription Small Intestine intestine
5 chr15:41954600-41964000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr15:41954600-41964000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:41954600-41964200 Weak transcription Fetal Stomach stomach
8 chr15:41954600-41964800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr15:41954600-41965600 Weak transcription Left Ventricle heart
10 chr15:41954600-41976200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr15:41954600-41983800 Weak transcription Thymus Thymus
12 chr15:41954600-42001000 Weak transcription Colonic Mucosa Colon
13 chr15:41954800-41963800 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr15:41954800-41964400 Weak transcription Brain Angular Gyrus brain
15 chr15:41954800-41964400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr15:41954800-41964400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr15:41954800-41964600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr15:41954800-41969000 Weak transcription Fetal Brain Female brain
19 chr15:41954800-41976200 Weak transcription Rectal Smooth Muscle rectum
20 chr15:41954800-41980800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr15:41955000-41964400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr15:41955000-41972600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr15:41955000-41988200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr15:41955200-41964200 Weak transcription Brain Anterior Caudate brain
25 chr15:41955200-41968200 Weak transcription Placenta Amnion Placenta Amnion
26 chr15:41955400-41964800 Weak transcription Fetal Brain Male brain
27 chr15:41955400-41965800 Weak transcription Fetal Intestine Small intestine
28 chr15:41957800-41963800 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr15:41957800-41964000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr15:41958400-41978400 Weak transcription Pancreas Pancrea
31 chr15:41958800-41973400 Weak transcription HMEC breast
32 chr15:41959000-41963800 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr15:41959000-41963800 Weak transcription HepG2 liver
34 chr15:41959000-41964000 Weak transcription A549 lung
35 chr15:41959000-41964200 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr15:41959000-41965000 Weak transcription Fetal Kidney kidney
37 chr15:41959200-41964200 Weak transcription Colon Smooth Muscle Colon
38 chr15:41959400-41988600 Weak transcription Muscle Satellite Cultured Cells --
39 chr15:41959400-41989000 Weak transcription NHDF-Ad bronchial
40 chr15:41959600-41981000 Weak transcription Osteobl bone
41 chr15:41960000-41963800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr15:41961400-41967200 Weak transcription Dnd41 blood
43 chr15:41961600-41975400 Weak transcription Aorta Aorta
44 chr15:41961800-41990600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr15:41962000-41968400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr15:41962000-41969800 Weak transcription NHEK skin
47 chr15:41962000-41980200 Weak transcription Duodenum Mucosa Duodenum
48 chr15:41962000-41983800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr15:41962000-41988400 Weak transcription Adipose Nuclei Adipose
50 chr15:41962000-41990800 Weak transcription NH-A brain

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Last update: Aug 31, 2015