Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11712856	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11714421	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11714471	0.91[ASN][1000 genomes]
rs12695617	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13314516	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1447683	0.91[ASN][1000 genomes]
rs1447695	0.98[ASN][1000 genomes]
rs1447696	0.84[ASN][1000 genomes]
rs1447698	0.84[ASN][1000 genomes]
rs1447699	0.84[ASN][1000 genomes]
rs2400301	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4383563	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4955480	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6769903	0.92[ASN][1000 genomes]
rs6774239	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6791061	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73225024	0.84[ASN][1000 genomes]
rs7619098	0.96[ASN][1000 genomes]
rs9289483	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9819372	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9850495	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9851083	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9861924	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9866896	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877515	chr3:134460368-134591138	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs1868166	DZIP1L	cis	parietal	SCAN
rs1868166	UBA5	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134460400-134462400	Weak transcription	HSMMtube	muscle
2	chr3:134461800-134463600	Enhancers	Fetal Muscle Leg	muscle
3	chr3:134462000-134462600	Enhancers	Psoas Muscle	Psoas

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