Variant report
| Variant | rs6774239 |
|---|---|
| Chromosome Location | chr3:134449528-134449529 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | lncRNA name | Chromosome Location | lncRNA alias |
|---|---|---|---|
| 1 | lnc-KY-4 | chr3:134447982-134450131 | ucscGeneNc_uc003epl_2 |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:33)
| rs_ID | r2[population] |
|---|---|
| rs11712856 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs11714421 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs11714471 | 0.87[ASN][1000 genomes] |
| rs11714557 | 0.81[ASN][1000 genomes] |
| rs12632055 | 0.80[ASN][1000 genomes] |
| rs12695617 | 0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
| rs13314516 | 0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs1447683 | 0.87[ASN][1000 genomes] |
| rs1447695 | 0.94[ASN][1000 genomes] |
| rs1447696 | 0.88[ASN][1000 genomes] |
| rs1447698 | 0.88[ASN][1000 genomes] |
| rs1447699 | 0.88[ASN][1000 genomes] |
| rs1562483 | 0.80[ASN][1000 genomes] |
| rs16841959 | 0.81[ASN][1000 genomes] |
| rs1868166 | 0.90[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs2400300 | 0.80[ASN][1000 genomes] |
| rs2400301 | 0.88[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs4383563 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs4955480 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs67368005 | 0.81[ASN][1000 genomes] |
| rs6769903 | 0.88[ASN][1000 genomes] |
| rs6791061 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs6802542 | 0.82[ASN][1000 genomes] |
| rs73222791 | 0.81[ASN][1000 genomes] |
| rs73222793 | 0.81[ASN][1000 genomes] |
| rs73225024 | 0.88[ASN][1000 genomes] |
| rs7428606 | 0.82[ASN][1000 genomes] |
| rs7619098 | 0.92[ASN][1000 genomes] |
| rs9289483 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs9850495 | 0.80[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs9851083 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs9861924 | 0.82[EUR][1000 genomes] |
| rs9866896 | 0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
