Variant report

Variant	rs7428606
Chromosome Location	chr3:134446797-134446798
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11714557	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11924192	0.88[ASN][1000 genomes]
rs12632055	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13314516	0.82[ASN][1000 genomes]
rs1447696	0.94[ASN][1000 genomes]
rs1447698	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1447699	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1562483	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16841959	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2400300	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67368005	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6774239	0.82[ASN][1000 genomes]
rs6802542	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73222791	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73222793	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73225024	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7619098	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134445600-134447200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr3:134446000-134447400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr3:134446000-134448600	Weak transcription	Psoas Muscle	Psoas
4	chr3:134446400-134448600	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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