Variant report

Variant	rs1870484
Chromosome Location	chr4:118727655-118727656
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10006883	1.00[EUR][1000 genomes]
rs10025641	1.00[EUR][1000 genomes]
rs10028949	1.00[EUR][1000 genomes]
rs10029291	1.00[EUR][1000 genomes]
rs10030138	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11562869	1.00[EUR][1000 genomes]
rs11562875	0.86[AFR][1000 genomes]
rs11562898	1.00[EUR][1000 genomes]
rs11562899	1.00[EUR][1000 genomes]
rs1459532	1.00[EUR][1000 genomes]
rs28429548	1.00[EUR][1000 genomes]
rs28654430	1.00[EUR][1000 genomes]
rs28659985	1.00[EUR][1000 genomes]
rs9998986	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879838	chr4:118681261-118753062	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118723200-118728000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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