Variant report

Variant	rs1872092
Chromosome Location	chr15:30918157-30918158
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr15:30917666-30918647	K562	blood:	n/a	n/a
2	POU2F2	chr15:30918128-30918490	GM12878	blood:	n/a	chr15:30918148-30918161 chr15:30918353-30918365
3	POLR2A	chr15:30917532-30918543	HepG2	liver:	n/a	n/a
4	SP1	chr15:30918154-30918429	H1-hESC	embryonic stem cell:	n/a	n/a
5	TCF7L2	chr15:30917783-30919219	Hela-S3	cervix:	n/a	chr15:30918800-30918816 chr15:30918800-30918816 chr15:30918804-30918813
6	SETDB1	chr15:30917755-30918372	U2OS	brain:	n/a	n/a
7	NFYB	chr15:30917790-30918396	K562	blood:	n/a	chr15:30918255-30918265 chr15:30918253-30918267 chr15:30918253-30918268 chr15:30918253-30918268
8	POLR2A	chr15:30917585-30918589	U87	brain:	n/a	n/a
9	HEY1	chr15:30917317-30919233	K562	blood:	n/a	n/a
10	E2F4	chr15:30918084-30918675	K562	blood:	n/a	chr15:30918279-30918286
11	YY1	chr15:30918092-30918427	K562	blood:	n/a	n/a
12	SIN3AK20	chr15:30918109-30918417	H1-hESC	embryonic stem cell:	n/a	n/a
13	ESRRA	chr15:30917582-30918653	GM12878	blood:	n/a	chr15:30918467-30918480
14	GABPA	chr15:30917592-30918431	A549	lung:	n/a	n/a
15	USF1	chr15:30917707-30918411	A549	lung:	n/a	n/a
16	POLR2A	chr15:30917523-30918787	GM19099	blood:	n/a	n/a
17	REST	chr15:30917580-30918447	A549	lung:	n/a	chr15:30918219-30918239 chr15:30918272-30918279 chr15:30918225-30918239 chr15:30918219-30918239
18	MXI1	chr15:30917606-30918861	IMR90	lung:	n/a	chr15:30918514-30918529
19	MYC	chr15:30917646-30918534	K562	blood:	n/a	n/a
20	ELF1	chr15:30917592-30918425	GM12878	blood:	n/a	chr15:30918035-30918046
21	CHD1	chr15:30917705-30918705	GM12878	blood:	n/a	n/a
22	POLR2A	chr15:30917391-30918683	A549	lung:	n/a	n/a
23	JUN	chr15:30917702-30918628	K562	blood:	n/a	chr15:30918257-30918266
24	POLR2A	chr15:30917526-30919128	GM12878	blood:	n/a	n/a
25	POLR2A	chr15:30916411-30919047	U87	brain:	n/a	n/a
26	TAF1	chr15:30918142-30918424	ECC-1	luminal epithelium:	n/a	n/a
27	TAF1	chr15:30918104-30918410	SK-N-SH	brain:	n/a	n/a
28	POLR2A	chr15:30917519-30918550	K562	blood:	n/a	n/a
29	ARID3A	chr15:30917841-30918381	K562	blood:	n/a	n/a
30	ZNF263	chr15:30917665-30918700	HEK293-T-REx	kidney:	n/a	n/a
31	POLR2A	chr15:30917482-30918629	H1-hESC	embryonic stem cell:	n/a	n/a
32	PML	chr15:30917684-30918469	GM12878	blood:	n/a	n/a
33	POLR2A	chr15:30917516-30918680	H1-hESC	embryonic stem cell:	n/a	n/a
34	MAZ	chr15:30917772-30918686	GM12878	blood:	n/a	chr15:30918648-30918658
35	POLR2A	chr15:30917440-30919117	Hela-S3	cervix:	n/a	n/a
36	ELF1	chr15:30917803-30918420	HepG2	liver:	n/a	chr15:30918035-30918046
37	STAT3	chr15:30917806-30918370	MCF10A-Er-Src	breast:	n/a	n/a
38	TAF1	chr15:30917475-30918735	H1-hESC	embryonic stem cell:	n/a	n/a
39	IRF1	chr15:30917657-30918518	K562	blood:	n/a	n/a
40	POU2F2	chr15:30917988-30918640	GM12891	blood:	n/a	chr15:30918148-30918161 chr15:30918353-30918365
41	EP300	chr15:30917788-30918452	GM12878	blood:	n/a	n/a
42	POLR2A	chr15:30917381-30919056	GM12878	blood:	n/a	n/a
43	TBP	chr15:30917647-30918473	GM12878	blood:	n/a	n/a
44	POLR2A	chr15:30917527-30919179	GM12891	blood:	n/a	n/a
45	CBX3	chr15:30917801-30918416	K562	blood:	n/a	n/a
46	MXI1	chr15:30917821-30918476	K562	blood:	n/a	n/a
47	CEBPD	chr15:30918007-30918616	K562	blood:	n/a	n/a
48	POLR2A	chr15:30918125-30918421	ECC-1	luminal epithelium:	n/a	n/a
49	MYBL2	chr15:30917352-30918841	HepG2	liver:	n/a	n/a
50	GATA2	chr15:30917522-30918289	HUVEC	blood vessel:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:30917826..30919798-chr15:32905900..32908033,2	K562	blood:
2	chr15:30918095..30918834-chr2:231728599..231729465,2	Hela-S3	cervix:
3	chr15:30916698..30918883-chr15:32905767..32907284,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARHGAP11B-1	chr15:30917557-30918469	NONHSAT041376

Variant related genes	Relation type
ARHGAP11B	TF binding region
ENSG00000247728	TF binding region
ENSG00000198826	Chromatin interaction
ENSG00000135916	Chromatin interaction
ENSG00000244952	Chromatin interaction
ENSG00000262728	Chromatin interaction

Extended variants
information (count: 131 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11854633	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12438898	0.84[ASN][1000 genomes]
rs12914068	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1905385	0.86[ASN][1000 genomes]
rs3964842	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7174701	0.81[ASN][1000 genomes]
rs8024735	0.84[ASN][1000 genomes]
rs8028519	0.82[ASN][1000 genomes]
rs8037312	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:122 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431371	chr15:30193316-31012794	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
2	esv1819007	chr15:30292944-31018462	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
3	esv1824179	chr15:30292944-31051705	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
4	nsv428300	chr15:30292944-31051705	ZNF genes & repeats Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
5	esv2758374	chr15:30292944-31152491	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
6	esv2760022	chr15:30292944-31177476	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
7	nsv518720	chr15:30346230-31106826	Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases
8	esv1821764	chr15:30348514-30926365	Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
9	esv1817932	chr15:30362487-30950529	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	diseases
10	nsv869831	chr15:30366124-31115047	Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases
11	nsv903757	chr15:30369153-31179534	Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
12	nsv1053277	chr15:30369914-31087321	Enhancers Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
13	nsv1053894	chr15:30369914-31088465	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
14	esv2760396	chr15:30369914-31099626	Strong transcription Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
15	nsv1040604	chr15:30370019-30920612	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
16	esv1821978	chr15:30372082-30954110	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
17	esv1822009	chr15:30372082-30956242	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
18	nsv568718	chr15:30382120-30918248	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
19	nsv9232	chr15:30384844-31090547	Strong transcription Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
20	nsv1050658	chr15:30386399-30920612	Strong transcription Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
21	nsv1035535	chr15:30386399-30925593	Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
22	nsv1048881	chr15:30386399-30933522	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
23	nsv1042426	chr15:30386399-30936285	Bivalent Enhancer Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
24	nsv1039382	chr15:30386399-31080276	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
25	nsv1049639	chr15:30386399-31087321	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
26	nsv1039392	chr15:30386399-31088465	Bivalent/Poised TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
27	esv2761732	chr15:30386411-31088477	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
28	esv1818185	chr15:30397265-30971752	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
29	esv1833508	chr15:30419215-30930500	Bivalent Enhancer Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
30	nsv1050595	chr15:30444264-30925593	Weak transcription Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
31	nsv1051750	chr15:30444264-30933522	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
32	nsv1045682	chr15:30444264-30950529	Enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
33	nsv1046268	chr15:30444264-30950990	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
34	nsv1044253	chr15:30444264-31084331	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
35	nsv1041754	chr15:30444264-31088465	Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
36	nsv1054844	chr15:30450032-30925593	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
37	nsv1042355	chr15:30450357-31099614	Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
38	nsv427955	chr15:30467980-31273174	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
39	nsv1043182	chr15:30493349-30925593	Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
40	nsv1036109	chr15:30493349-30946657	Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
41	nsv1043933	chr15:30493349-31099614	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
42	nsv1049370	chr15:30501813-30925593	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
43	nsv1054710	chr15:30501813-30933522	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
44	nsv1052897	chr15:30501813-31184303	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
45	nsv1050787	chr15:30505066-30925593	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
46	nsv1039647	chr15:30505750-31088465	Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
47	nsv1045597	chr15:30519571-31099614	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
48	nsv1041459	chr15:30544911-30930500	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
49	nsv1038766	chr15:30553894-31088465	Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
50	nsv1054935	chr15:30566890-30925593	Strong transcription Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:30916000-30919400	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr15:30916000-30920000	Active TSS	NHDF-Ad	bronchial
3	chr15:30916000-30921200	Active TSS	K562	blood
4	chr15:30916000-30922400	Active TSS	GM12878-XiMat	blood
5	chr15:30916200-30919600	Active TSS	Duodenum Mucosa	Duodenum
6	chr15:30916200-30919800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr15:30916200-30919800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr15:30916200-30920000	Active TSS	Thymus	Thymus
9	chr15:30916200-30920000	Active TSS	HepG2	liver
10	chr15:30916200-30920200	Active TSS	Fetal Thymus	thymus
11	chr15:30916200-30920600	Active TSS	Hela-S3	cervix
12	chr15:30916200-30921000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr15:30916400-30919400	Active TSS	Primary B cells from cord blood	blood
14	chr15:30916400-30919400	Active TSS	Fetal Stomach	stomach
15	chr15:30916400-30919600	Active TSS	Fetal Intestine Small	intestine
16	chr15:30916400-30919800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr15:30916400-30919800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr15:30916400-30920000	Active TSS	Dnd41	blood
19	chr15:30916600-30918600	Active TSS	Adipose Nuclei	Adipose
20	chr15:30916600-30918600	Active TSS	Brain Anterior Caudate	brain
21	chr15:30916600-30918600	Active TSS	Skeletal Muscle Female	skeletal muscle
22	chr15:30916600-30918800	Active TSS	Primary B cells from peripheral blood	blood
23	chr15:30916600-30918800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
24	chr15:30916600-30918800	Active TSS	Aorta	Aorta
25	chr15:30916600-30918800	Active TSS	Brain Angular Gyrus	brain
26	chr15:30916600-30918800	Active TSS	Brain Cingulate Gyrus	brain
27	chr15:30916600-30918800	Active TSS	Brain Hippocampus Middle	brain
28	chr15:30916600-30918800	Active TSS	Colon Smooth Muscle	Colon
29	chr15:30916600-30918800	Active TSS	Pancreatic Islets	Pancreatic Islet
30	chr15:30916600-30918800	Active TSS	Fetal Muscle Trunk	muscle
31	chr15:30916600-30918800	Active TSS	Left Ventricle	heart
32	chr15:30916600-30918800	Active TSS	Ovary	ovary
33	chr15:30916600-30918800	Active TSS	Psoas Muscle	Psoas
34	chr15:30916600-30918800	Active TSS	Right Atrium	heart
35	chr15:30916600-30918800	Active TSS	Right Ventricle	heart
36	chr15:30916600-30918800	Active TSS	Sigmoid Colon	Sigmoid Colon
37	chr15:30916600-30918800	Active TSS	Skeletal Muscle Male	skeletal muscle
38	chr15:30916600-30918800	Active TSS	Stomach Mucosa	stomach
39	chr15:30916600-30919000	Active TSS	Breast Myoepithelial Primary Cells	Breast
40	chr15:30916600-30919000	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
41	chr15:30916600-30919000	Active TSS	Brain Inferior Temporal Lobe	brain
42	chr15:30916600-30919000	Active TSS	Placenta	Placenta
43	chr15:30916600-30919000	Active TSS	Stomach Smooth Muscle	stomach
44	chr15:30916600-30919200	Active TSS	Primary T cells from cord blood	blood
45	chr15:30916600-30919200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
46	chr15:30916600-30919200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
47	chr15:30916600-30919200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
48	chr15:30916600-30919200	Active TSS	Primary T helper cells PMA-I stimulated	--
49	chr15:30916600-30919200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr15:30916600-30919200	Active TSS	Colonic Mucosa	Colon

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