Variant report

Variant rs187579304
Chromosome Location chr6:35285856-35285857
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35276000-35293800 Weak transcription K562 blood
2 chr6:35280800-35293200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr6:35281600-35291600 Strong transcription Primary B cells from peripheral blood blood
4 chr6:35282000-35293400 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr6:35282000-35293600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr6:35282000-35293800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr6:35282200-35293600 Strong transcription Primary monocytes fromperipheralblood blood
8 chr6:35282600-35293600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:35282800-35293600 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr6:35283400-35293400 Strong transcription Primary B cells from cord blood blood
11 chr6:35283800-35293400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:35284000-35291600 Strong transcription Dnd41 blood
13 chr6:35284000-35293000 Strong transcription Primary T cells from cord blood blood
14 chr6:35284000-35293400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
15 chr6:35284200-35286000 Strong transcription Primary hematopoietic stem cells blood
16 chr6:35284200-35290800 Strong transcription GM12878-XiMat blood
17 chr6:35284200-35293400 Strong transcription Primary T helper naive cells from peripheral blood blood
18 chr6:35284400-35292800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr6:35284400-35293600 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr6:35284800-35290600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr6:35285200-35286000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:35285200-35286000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr6:35285200-35286000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
24 chr6:35285200-35286600 Active TSS Brain Anterior Caudate brain
25 chr6:35285200-35286800 Active TSS Duodenum Smooth Muscle Duodenum
26 chr6:35285200-35286800 Active TSS A549 lung
27 chr6:35285200-35290800 Strong transcription Primary T killer memory cells from peripheral blood blood
28 chr6:35285200-35292800 Strong transcription Thymus Thymus
29 chr6:35285400-35286000 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
30 chr6:35285400-35286000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
31 chr6:35285400-35286000 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
32 chr6:35285400-35286000 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
33 chr6:35285400-35286000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
34 chr6:35285400-35286000 Flanking Bivalent TSS/Enh Fetal Brain Female brain
35 chr6:35285400-35286000 Flanking Active TSS Fetal Intestine Large intestine
36 chr6:35285400-35286000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
37 chr6:35285400-35286000 Flanking Active TSS Stomach Smooth Muscle stomach
38 chr6:35285400-35286200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
39 chr6:35285400-35286600 Active TSS Brain Angular Gyrus brain
40 chr6:35285400-35286600 Active TSS Brain Hippocampus Middle brain
41 chr6:35285400-35286600 Active TSS Colon Smooth Muscle Colon
42 chr6:35285400-35286800 Genic enhancers Primary T cells fromperipheralblood blood
43 chr6:35285400-35286800 Genic enhancers Primary T helper cells fromperipheralblood blood
44 chr6:35285400-35286800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr6:35285400-35286800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
46 chr6:35285400-35289200 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr6:35285400-35289800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr6:35285400-35293400 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr6:35285600-35286000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
50 chr6:35285600-35286000 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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