Variant report
| Variant | rs1877260 |
|---|---|
| Chromosome Location | chr12:51657783-51657784 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:51638400-51662800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr12:51639800-51662800 | Weak transcription | Fetal Stomach | stomach |
| 3 | chr12:51640200-51662800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 4 | chr12:51640200-51662800 | Weak transcription | Pancreas | Pancrea |
| 5 | chr12:51640400-51659000 | Weak transcription | HMEC | breast |
| 6 | chr12:51640400-51661600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr12:51640600-51661800 | Weak transcription | NH-A | brain |
| 8 | chr12:51641600-51663000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 9 | chr12:51642000-51662800 | Weak transcription | NHLF | lung |
| 10 | chr12:51642200-51661000 | Weak transcription | Colonic Mucosa | Colon |
| 11 | chr12:51642200-51662800 | Weak transcription | Gastric | stomach |
| 12 | chr12:51642200-51662800 | Weak transcription | Right Ventricle | heart |
| 13 | chr12:51642200-51663000 | Weak transcription | Lung | lung |
| 14 | chr12:51642400-51659400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 15 | chr12:51642400-51662800 | Weak transcription | Primary B cells from cord blood | blood |
| 16 | chr12:51642600-51658000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 17 | chr12:51642600-51659200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 18 | chr12:51642600-51659800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 19 | chr12:51642600-51662600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 20 | chr12:51642800-51658800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 21 | chr12:51643000-51662600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 22 | chr12:51643200-51662800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 23 | chr12:51644800-51659200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 24 | chr12:51645000-51658800 | Weak transcription | Dnd41 | blood |
| 25 | chr12:51645200-51661800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr12:51647800-51659200 | Weak transcription | Placenta | Placenta |
| 27 | chr12:51648800-51662600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 28 | chr12:51649400-51661400 | Weak transcription | Esophagus | oesophagus |
| 29 | chr12:51649400-51662800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 30 | chr12:51649600-51659400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 31 | chr12:51651000-51662800 | Weak transcription | Liver | Liver |
| 32 | chr12:51651200-51659200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr12:51651200-51660200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 34 | chr12:51651400-51662800 | Weak transcription | Fetal Intestine Large | intestine |
| 35 | chr12:51652000-51657800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr12:51653400-51663400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 37 | chr12:51654200-51662800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 38 | chr12:51656600-51658000 | Genic enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 39 | chr12:51656600-51658200 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr12:51656600-51659000 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 41 | chr12:51656800-51659000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 42 | chr12:51656800-51660000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 43 | chr12:51656800-51662800 | Weak transcription | Ovary | ovary |
| 44 | chr12:51656800-51662800 | Weak transcription | Spleen | Spleen |
| 45 | chr12:51657000-51658200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 46 | chr12:51657000-51658200 | Genic enhancers | NHEK | skin |
| 47 | chr12:51657000-51658800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 48 | chr12:51657000-51659000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 49 | chr12:51657000-51659000 | Weak transcription | K562 | blood |
| 50 | chr12:51657000-51660800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
