Variant report

Variant rs2271821
Chromosome Location chr12:51664147-51664148
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51661000-51665000 Active TSS Colonic Mucosa Colon
2 chr12:51661400-51664800 Active TSS Esophagus oesophagus
3 chr12:51661600-51664600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr12:51661800-51664400 Active TSS Rectal Mucosa Donor 29 rectum
5 chr12:51662600-51664600 Active TSS Sigmoid Colon Sigmoid Colon
6 chr12:51662800-51664600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr12:51662800-51664600 Active TSS Gastric stomach
8 chr12:51662800-51664800 Active TSS H9 Cell Line embryonic stem cell
9 chr12:51662800-51664800 Bivalent/Poised TSS Fetal Stomach stomach
10 chr12:51662800-51664800 Active TSS Ovary ovary
11 chr12:51662800-51665000 Active TSS ES-WA7 Cell Line embryonic stem cell
12 chr12:51662800-51665000 Active TSS Left Ventricle heart
13 chr12:51662800-51665000 Active TSS Right Atrium heart
14 chr12:51662800-51665000 Active TSS Right Ventricle heart
15 chr12:51662800-51665000 Active TSS Small Intestine intestine
16 chr12:51662800-51665400 Active TSS Duodenum Smooth Muscle Duodenum
17 chr12:51663000-51664200 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
18 chr12:51663000-51664400 Active TSS Fetal Adrenal Gland Adrenal Gland
19 chr12:51663000-51664400 Bivalent/Poised TSS Fetal Muscle Leg muscle
20 chr12:51663000-51664600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
21 chr12:51663000-51664600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
22 chr12:51663000-51664600 Active TSS Brain Anterior Caudate brain
23 chr12:51663000-51664600 Active TSS NHLF lung
24 chr12:51663000-51664600 Active TSS Osteobl bone
25 chr12:51663000-51665000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr12:51663000-51665000 Flanking Active TSS Primary B cells from cord blood blood
27 chr12:51663000-51665200 Active TSS Pancreatic Islets Pancreatic Islet
28 chr12:51663200-51664200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr12:51663200-51664200 Bivalent/Poised TSS Fetal Brain Female brain
30 chr12:51663200-51664400 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:51663200-51664400 Active TSS Primary T cells from cord blood blood
32 chr12:51663200-51664400 Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr12:51663200-51664400 Active TSS Brain Cingulate Gyrus brain
34 chr12:51663200-51664400 Active TSS Brain Inferior Temporal Lobe brain
35 chr12:51663200-51664400 Active TSS HMEC breast
36 chr12:51663200-51664400 Active TSS HSMMtube muscle
37 chr12:51663200-51664600 Active TSS iPS-15b Cell Line embryonic stem cell
38 chr12:51663200-51664600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr12:51663200-51664600 Active TSS Rectal Mucosa Donor 31 rectum
40 chr12:51663200-51664800 Active TSS Breast Myoepithelial Primary Cells Breast
41 chr12:51663200-51664800 Active TSS Brain Angular Gyrus brain
42 chr12:51663200-51664800 Active TSS Colon Smooth Muscle Colon
43 chr12:51663400-51664200 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
44 chr12:51663400-51664200 Weak transcription Fetal Kidney kidney
45 chr12:51663400-51664400 Active TSS H1 Cell Line embryonic stem cell
46 chr12:51663400-51664400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr12:51663400-51664400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
48 chr12:51663400-51664400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr12:51663400-51664400 Active TSS Muscle Satellite Cultured Cells --
50 chr12:51663400-51664400 Active TSS Duodenum Mucosa Duodenum

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